Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1085g00010 ATGGATTTGAATGAAGTCTTGCTGAAATCAACACACATGGCCTCTCAGCAGATAACAGAAGAAGCTGTTTACCTTTGCACTGGAAATCTATTGCCCAAAGACATTGAGCAAATATCTTACTGGCTTCTAAATGAACAATATTCAGAGAGCTTTAAAAGAATTAATGATATGAAAACAAGGAAAGGACTGGCCCTTGTTGATATTGTAAGAGAAGTGACAATGTTTGTATTTAAGATTAAGATACCTCCAGCTGTTCGAGTGCAATTGGTGAATGATTTGGCTGACATAGAAGTTATTAGGATCAAGGAGAGAAGGTTGAATTTCAGGGCCCCTAATATCTTAAATGAACAATTCGAGAAAGAGGGAAACCTAGAAAGACTATAA 384 0.3646 MDLNEVLLKSTHMASQQITEEAVYLCTGNLLPKDIEQISYWLLNEQYSESFKRINDMKTRKGLALVDIVREVTMFVFKIKIPPAVRVQLVNDLADIEVIRIKERRLNFRAPNILNEQFEKEGNLERL 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1085g00010 127 Gene3D - 31 103 - -
Vivi1085g00010 127 SUPERFAMILY post-AAA+ oligomerization domain-like 32 98 IPR008921 GO:0003677|GO:0006260
Vivi1085g00010 127 FunFam Replication factor C subunit 5 30 102 - -
Vivi1085g00010 127 Pfam Replication factor C C-terminal domain 32 97 IPR013748 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1085g00010 7 97 Core DNA Replication Machinery Family AT1G77470 66.667 2.41e-42 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1085g00010 K10756 - vvo:131639594 249.98