Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1070g00009 ATGGAGTCAAAGTGCTGCATGAACGGTTTGTGTGGTGCCTCCACGTCGATACGGTGGCGGAAAGGTTGGATACTTCGATCCGGTGAATTTGCCGATCTATGTGATAAGTGCGGTTCTGCTTATGAGAAATCAGAGTTTTGTGATGTGTTCCATGCGAAAGATTCTGGTTGGAGAGAGTGCACTTCATGTGGCAAGCGTCTTCACTGTGGATGTGTTGCTTCAAGGTCTCAGCTTGAAATACTTGATACTAGTGGTGTAAGCTGTATAAACTGTGCAAGTAATTTGGGACTTCAACCTATTGTTAGTAATGAAAAGCCCAATGAATCTGAAACAGCAAAGGGAAAACATGTCAGTGCGCAGCAGTGCATATCTTTGGTTGACCAATTAAATGTGAAGGATATGCAAGTTGGGAATTATGTAGGAAATGACGGTCTGAGGTGCTGGCTCAAACCTCACAATGTTGATATGGATGGACCTTCTACAGAAATCAAACCAGAAGTTTTACATTCTGTTGGAGAATTTGGTAACACTTCGATATCTCAATTTCATCTTGAGTCAAATGGATCATCTAGGACTGACAATGTAGAGAACTGTAAGGCAGACAACATGCAAGGTCTATATGAATCACTGGCACATACAAATTTGAGTATGACCCTTGCTGCCCCTTTGGTAAATTTGAATCCCTTTCATAATGCCCTTGTTGATGAAAGAGAACAAAGAAAAATGTCACCTCCACTTCTATTGGCGTCTAGATCTCGTCATCTTTTACCTAGACCCCCTAGGCCAACTCTCTCTCCAGGCTTAGAAGGTAATGCAGGCACGGTGTCCCAGATTCGTATAGCAAGGCCTCCTGCTGAAGGACGAGGAAGGAATCAGTTGCTTCCACGATATTGGCCTAGAATTACAGATCAAGAGTTGCAGCAAATATCGGGAGATCCAAATTCCACCATTGTGCCACTCTTTGAAAAGATGCTTAGCGCAAGTGATGCTGGTCGAATTGGTCGGTTGGTTCTACCAAAAGCATGTGCTGAAGCATATTTTCCTCCTATATCTCAACCTGAGGGCCTTCCTCTGCGAATCCAAGATGTGAAAGGAAAAGAATGGATGTTTCAATTTAGATTTTGGCCAAATAACAACAGTAGGATGTATGTTTTAGAAGGAGTAACCCCCTGCATTCAGTCTATGCAACTGCAAGCTGGTGATACTGTTACATTTAGCCGTATGGACCCTGAGGGGAAACTTATAATGGGGTTCAGGAAGGCAACAAATTCTACTTCATTACAGGAAACTTTTCCGTCTAATATGCCCAATGGTTCTCATTCAAGTGAAACTTCCTATTCTGGTGTTTATGAGAATATACCTATATTAAGTGGTTACCGTGGCCTTCTTCAGTCTCAAAAGGGATGTTCAGAAACCCACCTAAATGTGCTGTCTAAAAAGTGGAACTCAGTTGGCGGTGACATGGATTGGCATAATGTAGAAGCACCCGAAAGCAGGAAAAGAGATGCATTGTCTTTGCCACCTGTGCTGGTTCCCGAGAAGAAAAGAACCAGAAATATTGGGTCAAAGAGTAAGAGGTTGCTTATTGATAGCCAGGATGCACTGGAGCTGAAACTTACTTGGGAAGAGGCTCAGGATTTACTTCGTCCACCGCCAGAAGTTAAGCCAAGTGTTGTCATGATTGAGGACCACATATTTGAAGAATATGAAGAGCCTCCTGTCTTTGGAAAGAAGAGTATATTTGTGGTACGATCTAATGGGATAAATGAGCAGTGGGCACAATGTGATAGTTGCTTAAAATGGCGGAAGTTACCGGTTGATGTACTTATTCCCTCTAAGTGGACATGTATGGAGAATTTTTGGGATCAAAGCAGCAGGTGTTCGTGTGCTGCTCCCAATGAATTGAACCCAAGGGAACTGGATTATCTTTTGAGAATGAACAAGGAATTCAAGAAACAAAGACTAGCACTAGCAAGCCAGAGGCCAGCTTTGGAACGTGAATCTTCTGGTCTTGATGCTTTGGCCAGTGCTGCAGTACTTGGAGATGATGCAAGTGACTCTGGCAGGACACCAGTCGTGACCAGTACCACTACAAAACACCCTCGTCATAGACCCGGGTGCTCCTGCATTGTCTGTATCCAGCCACCAAGTGGGAAGGGAAAACACAAACCTTCATGCACCTGTAACGTGTGCTTGACAGTTAAACGTCGGTTTAAAACCCTGATGATGCGAAAGAAGAAACGTCAATCTGAGCGAGAAGCTGAGATTGCTCAGAAAAATCAGCAATCATGGAGGACCAATGATGAATCAGAAGTAGACAGCACTACTCGACATTTAACTCCAGTTGATGGTTCGGAGATTGAAGCAAGGGTGCCAAATGAGTTAAGCTCAAGGAGTCAAGACCAAGTGGTTGAAGCTGCCAAAGGACAATTAGACTTGAACTCCCAACCGGACCAGGAAGACATGCAAGCTGGACCAAACACTTTGAGCATGATGTCTCTTCTTGAAGAAGCAAATCTCCCATTGGAGACATACCTGAAGCAAAATGGTCTCTCTAGCTTGATATCAGAGCAGCAAACAAACTCAACATCAAATGTGCAGCCACAGACAACCACTGAGAGTGAGGGAAGACAAAATGAAGATTGCTGTACTGCTTCTGCAGGTCATGAACAGGTAGGCAGTCCTGAAGAAAACAGTGAGCAAGACAGAGACCAAAACAATTCAGTTTCATGA 2733 0.4372 MESKCCMNGLCGASTSIRWRKGWILRSGEFADLCDKCGSAYEKSEFCDVFHAKDSGWRECTSCGKRLHCGCVASRSQLEILDTSGVSCINCASNLGLQPIVSNEKPNESETAKGKHVSAQQCISLVDQLNVKDMQVGNYVGNDGLRCWLKPHNVDMDGPSTEIKPEVLHSVGEFGNTSISQFHLESNGSSRTDNVENCKADNMQGLYESLAHTNLSMTLAAPLVNLNPFHNALVDEREQRKMSPPLLLASRSRHLLPRPPRPTLSPGLEGNAGTVSQIRIARPPAEGRGRNQLLPRYWPRITDQELQQISGDPNSTIVPLFEKMLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLRIQDVKGKEWMFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRMDPEGKLIMGFRKATNSTSLQETFPSNMPNGSHSSETSYSGVYENIPILSGYRGLLQSQKGCSETHLNVLSKKWNSVGGDMDWHNVEAPESRKRDALSLPPVLVPEKKRTRNIGSKSKRLLIDSQDALELKLTWEEAQDLLRPPPEVKPSVVMIEDHIFEEYEEPPVFGKKSIFVVRSNGINEQWAQCDSCLKWRKLPVDVLIPSKWTCMENFWDQSSRCSCAAPNELNPRELDYLLRMNKEFKKQRLALASQRPALERESSGLDALASAAVLGDDASDSGRTPVVTSTTTKHPRHRPGCSCIVCIQPPSGKGKHKPSCTCNVCLTVKRRFKTLMMRKKKRQSEREAEIAQKNQQSWRTNDESEVDSTTRHLTPVDGSEIEARVPNELSSRSQDQVVEAAKGQLDLNSQPDQEDMQAGPNTLSMMSLLEEANLPLETYLKQNGLSSLISEQQTNSTSNVQPQTTTESEGRQNEDCCTASAGHEQVGSPEENSEQDRDQNNSVS 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1070g00009 910 Gene3D - 589 645 - -
Vivi1070g00009 910 SMART B3_2 321 421 IPR003340 GO:0003677
Vivi1070g00009 910 CDD B3_DNA 319 420 IPR003340 GO:0003677
Vivi1070g00009 910 Pfam B3 DNA binding domain 321 420 IPR003340 GO:0003677
Vivi1070g00009 910 MobiDBLite consensus disorder prediction 682 703 - -
Vivi1070g00009 910 MobiDBLite consensus disorder prediction 742 805 - -
Vivi1070g00009 910 Pfam CW-type Zinc Finger 591 634 IPR011124 GO:0008270
Vivi1070g00009 910 Gene3D - 299 426 IPR015300 -
Vivi1070g00009 910 SUPERFAMILY DNA-binding pseudobarrel domain 318 421 IPR015300 -
Vivi1070g00009 910 ProSiteProfiles Zinc finger CW-type profile. 586 637 IPR011124 GO:0008270
Vivi1070g00009 910 MobiDBLite consensus disorder prediction 688 702 - -
Vivi1070g00009 910 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 3 862 - -
Vivi1070g00009 910 MobiDBLite consensus disorder prediction 856 910 - -
Vivi1070g00009 910 FunFam B3 domain-containing transcription repressor VAL1 299 426 - -
Vivi1070g00009 910 MobiDBLite consensus disorder prediction 856 885 - -
Vivi1070g00009 910 ProSiteProfiles B3 DNA-binding domain profile. 321 422 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1070g00009 1 892 B3 DNA Binding Superfamily AT4G32010 48.556 0.0 785
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Vivi1070g00009 B3 1.4e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1070g00009 K09287 - gmx:100778833 1504.58