Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1068g00010 ATGAACAATTTTCACAAATTCCCTCTTCTACTAATTCTAATCTTTCTCACATTACAAAAACCAGTAACATCAAAAACCGAATGCACTCACAAATGCGGCAATCTCCACATTCAATTCCCATTCCATCTCAAAAACAACACCAACCACACCAAACACTCCCCTCAACCCTTCCAATTATCATGCACAGATCAACATCAAACAGTGTTACAATTCCCCACAATTCCAGTCACGCTTTTCATCAAACACATAGACTACAAAACACAAAAACTCCAAATCTACGACCCAAATAACTGTCTTTCAAGTCAGTTATTCAAACTAGGAAACTCATCCGTTTCGCCTTTCCAGTTTCACTTCCATGAGTTTAATATACAGCGGAACGTTTCATTCTTTCGTTGCGATTCGAGAAATGGATGTTTGATTAAGCAACGTGATTCTGGTGCGGATTTTGTTGATCCTGAATTAGTTTCTTGTAGAAAAGTGAGTGATGTATTGAATGTGGGTTGGATGATTGAGGAATGGGATGATGATGATGTTACAGAGAGTTTGATTTTGGAGTGGTCTAAACCTAATTGTAGTTTTTGTGAAGTTCAAGGGAAGAAATGTAGATGGAAGAATGGTAGTAGAAGTGGTGAAGTTGAATGCTTTGTTTGTCCATCAAATGGGATTGCTAGATCTACTGTTCTTCTAATTACTGCTGGGGTTATAGTTGGCTCCATGATTTTGCTGCTATTGGCAAAAGGTTTGCTTCATATATATCGCTATTTTAAGATGAAAGGAGATGACATAGCAAGGATAGAGAAGTTCTTAGAGAATTATAGAGCAATGAGACCTACAAGATTCACTTATGCTGATATTAAGAGAATTACAAATGGTTTTAAGGAGAGTTTAGGAGAAGGAGCTCATGGAGCTGTGTTTAAAGGCATGCTCTCCCAAGAAATTTTGGTTGCTGTGAAGGTACTCAATGAAACACAAGGAGATGGAAAAGATTTCATTAATGAAGTTGGAACCATGGGAAAAATTCATCATATCAATGTTGTTCGTTTGCTTGGATTTTGCGCTGACGGGTTCCACCGTGCGCTTGTCTACGATTTCTTTCCAAATGGGTCGTTGCAAAATTTCTTGGCGCCGCCGGAGAACAAGGATGTTTTTCTTGGTTGGGAAAAGTTGCAACAAATTGCTCTTGGTGTTGCAAGAGGGATTGAGTATCTTCATATTGGTTGTGATCAGAGAATACTTCACTTTGATATCAATCCACACAATGTATTAATAGATGATAATCTGAGTCCCAAAATTACTGATTTTGGACTTGCGAAATTGTGTCCGAAAAATCAAAGCACTGTGTCTATGACCGCGGCTAGAGGAACTTTGGGCTACATTGCACCTGAAGTTTTCTCAAGAAACTTTGGAAACGTGTCTTATAAGTCTGACATTTATAGCTATGGAATGTTGTTGCTGGAGATGGTTGGTGGAAGAAAGAATACTAACCTGTCGGCAGAGGAAACATTCCAAGTTTTGTATCCGGAATGGATCCATAATCTGGTTGAAGGGAAAGATGTGCAAGTTAATATCGAGGATGAGGGAGATGTTAGAATTGCAAAGAAACTTGCGCTTGTGGGACTTTGGTGTATTCAGTGGAATCCGGTGGATCGTCCGTCTATGAAAACTGTGGTACAAATGCTTGAAGGGAAAGGAGAAAAATTAATGGCACCCCCTACTCCTTTTGACTCTGTTGATGTCAATAGAACAAACGCGGTTATTCCAACCCGACATCCGAGTTTTGAGTTAGAAGTTATTCCTGAAACAGAGTAA 1809 0.3914 MNNFHKFPLLLILIFLTLQKPVTSKTECTHKCGNLHIQFPFHLKNNTNHTKHSPQPFQLSCTDQHQTVLQFPTIPVTLFIKHIDYKTQKLQIYDPNNCLSSQLFKLGNSSVSPFQFHFHEFNIQRNVSFFRCDSRNGCLIKQRDSGADFVDPELVSCRKVSDVLNVGWMIEEWDDDDVTESLILEWSKPNCSFCEVQGKKCRWKNGSRSGEVECFVCPSNGIARSTVLLITAGVIVGSMILLLLAKGLLHIYRYFKMKGDDIARIEKFLENYRAMRPTRFTYADIKRITNGFKESLGEGAHGAVFKGMLSQEILVAVKVLNETQGDGKDFINEVGTMGKIHHINVVRLLGFCADGFHRALVYDFFPNGSLQNFLAPPENKDVFLGWEKLQQIALGVARGIEYLHIGCDQRILHFDINPHNVLIDDNLSPKITDFGLAKLCPKNQSTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNLSAEETFQVLYPEWIHNLVEGKDVQVNIEDEGDVRIAKKLALVGLWCIQWNPVDRPSMKTVVQMLEGKGEKLMAPPTPFDSVDVNRTNAVIPTRHPSFELEVIPETE 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1068g00010 602 FunFam PR5-like receptor kinase 365 571 - -
Vivi1068g00010 602 Gene3D Phosphorylase Kinase; domain 1 265 364 - -
Vivi1068g00010 602 ProSiteProfiles Protein kinase domain profile. 290 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1068g00010 602 ProSitePatterns Protein kinases ATP-binding region signature. 296 318 IPR017441 GO:0005524
Vivi1068g00010 602 Pfam Wall-associated receptor kinase galacturonan-binding 28 94 IPR025287 GO:0030247
Vivi1068g00010 602 SUPERFAMILY Protein kinase-like (PK-like) 271 561 IPR011009 -
Vivi1068g00010 602 Pfam Protein kinase domain 293 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1068g00010 602 PANTHER RUST RESISTANCE KINASE LR10-RELATED 263 576 IPR045874 GO:0004672
Vivi1068g00010 602 FunFam serine/threonine-protein kinase PBS1-like 261 364 - -
Vivi1068g00010 602 Gene3D Transferase(Phosphotransferase) domain 1 365 569 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1068g00010 187 573 Receptor kinase-like Gene Family AT1G66910 44.361 3.75e-106 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vivi1068g00010 Pkinase 3.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1068g00010 - - gmx:100819302 874.389