Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1064g00003 ATGGAAGAGGAACATAAGGGAGGTGTAGAAGTAAAGTACAGAGGTGTAAGGAGAAGGCCATGGGGAAAATATGGGGCAGAGATAAGAGATCCTACAAAGCCAACCGGAAGACAATGGTTAGGAACATTTGACACAGCTGAGGAAGCTGCTAGAGCTTATGATTGTGCTGCCATTCGTTTGAGAGGTGCTCTTGCAATTCTCAACTTTCCTGATGAATACCATTTACATCTTTCTTCATTTTCGCGCTCGTCGTCGTCGCCTTCGTCGTCTAATGTTGCCTTTGGCAGCAGTTCTTCTAGACAGCAAAATGAAATTATTGAGTTTGAGTATTTGGATAACAAAGTGTTGGAAGATCTTCTTGGATCATCGAAAGAAGAGAATGAAAGGAATCGTGATTAA 399 0.4211 MEEEHKGGVEVKYRGVRRRPWGKYGAEIRDPTKPTGRQWLGTFDTAEEAARAYDCAAIRLRGALAILNFPDEYHLHLSSFSRSSSSPSSSNVAFGSSSSRQQNEIIEFEYLDNKVLEDLLGSSKEENERNRD 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1064g00003 132 MobiDBLite consensus disorder prediction 79 100 - -
Vivi1064g00003 132 ProSiteProfiles AP2/ERF domain profile. 12 70 IPR001471 GO:0003700|GO:0006355
Vivi1064g00003 132 Pfam AP2 domain 12 62 IPR001471 GO:0003700|GO:0006355
Vivi1064g00003 132 CDD AP2 12 71 IPR001471 GO:0003700|GO:0006355
Vivi1064g00003 132 PANTHER DNA-BINDING DOMAIN 8 123 IPR044808 GO:0003700|GO:0009873
Vivi1064g00003 132 SUPERFAMILY DNA-binding domain 12 72 IPR016177 GO:0003677
Vivi1064g00003 132 Gene3D AP2/ERF domain 11 71 IPR036955 GO:0003700|GO:0006355
Vivi1064g00003 132 FunFam Ethylene-responsive transcription factor 2 12 72 - -
Vivi1064g00003 132 PRINTS Ethylene responsive element binding protein signature 36 52 IPR001471 GO:0003700|GO:0006355
Vivi1064g00003 132 PRINTS Ethylene responsive element binding protein signature 13 24 IPR001471 GO:0003700|GO:0006355
Vivi1064g00003 132 SMART rav1_2 12 75 IPR001471 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1064g00003 10 122 AP2-EREBP Transcription Factor Family AT3G23230 60.169 3.84e-39 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Vivi1064g00003 AP2 6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1064g00003 - - gmx:100807295 165.236