Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1061g00001 ATGAGGACAAAATATTTTTTTTTACAAATCCATTTTCTTCCTCATTCCATCTCCATCCCCAAACCTCCATTTTTTTTTTCATCTCCAACCTTCAACCTCTATCTCCAACTTCCATTTTTTTATCTCCAACCTTCAACCTCCATTTTTCATCTCCAACCTCGAACCTCCATTTTTCATCTCCAAGTTTCATATCCTACCTCTATTTTTTCCTCATCTCCAACCTCCATCCCCAATCTCGAACCTCCATTTTTCATCTCCAACCTCCATCCCCAATCTCGAACCTTCATTTTTCATCTCCAACCCCCACCTTCCATTTTCCATCTCCAACCTCGAACCTCCATTTTTCATCTCCAATTTCCATACCTACCTCCATTTTCCAAATTTCATTTCCATTCACGAACGTGTGCTGCCTCAACCATTGACATGCGTAGTGTCATCTCATCCCAAACACGTATTCAAAACCATTCTATAGGTTTCTCTCCCTCTAGAACAAAACAAAAAGCTTTAACTCTAACTCTAGATATTTCAACAAAACTTGCTTTTGCACATGTTATATACACCATGTCATATGTAACATCACATTCAGATTCTGCTACTAAAAACAATAACATATGTAGTAGTAGTAGTAATACGAGGAAGTTGTTTAATATGGATGATGATACTAATAATGTTGTAGCCGACATTGATATTAATAAAACTAAACAAATTGAACGGCGTTACGAAGAATATAGGAGGAAGAGAAAGCGTCCTTGTAAAGCGCCAGTGATCCCTACGATGGAATCAACTACCGGAGACACGGCCACGGCGTCACACGGTTTTATTTCGGTGATTGGACGTAGGAGGGTGATGGAAGACGCTATCAAGGTGATTCCACGTTTTATGGCGGCGGAAAAGCAACCGTGTGGATATGATTTCTTTGCGGTTTATGACGGACACGGTGGGATGACAGTGGCGAATGCTTGTCGTGATAGGTTGCACTTGTTGTTGGCGGAGGAAGTGAAGGAGGGTGGAGATCAAGGATTGGATTGGTGTAAAGCTATGTATTCTTGTTTCATGAAGATGGATCGTGAAATTGGAGTCGGTGGTGGTTGTAGTGGGGATGTTGATGCGAATAACGTGGGTTCTACGGCGGCTGTTGTGGTGGTTGGGAAAGAGGAGATCGTTGTGGCGAACTGTGGTGACTCAAGGGCGGTTTTGTGTAGTGGCGGTGTAGCAGTTGCACTTTCACGTGATCATAAGCCAGATCTTCCAGATGAAAGAGAGAGGATTGAAGCAGCTGGTGGAAGAGTGATTAATTGGAACGGGAGTCGCGTTCTAGGAATTCTTGCTACTTCTAGATCCATAGGGGATCATTGCATGAAGCCATTTGTGATATCTCAACCAGAGATCAACGTGCATGGAAGAACAAAATCAGACGAGTTTGTTGTGGTGGCAAGTGATGGACTTTGGGATGTTGTATCAAACAGTTTTGTTTGTGAAGTGGTTAAAAGCTGTCTCCAAGGTCATATGAGGAGGAATAATAGTGATAATGTAAGAGAGGATCTCAGTATTAAAGGTTATGCAGCTGAGGCTGCTGCAATTCTAGCTGAATTGGCTATGGCTAAGGGAAGCAAAGACAACATCAGTGTTATAGTCATCCAACTCAACAACACTAACATTTGA 1662 0.4212 MRTKYFFLQIHFLPHSISIPKPPFFFSSPTFNLYLQLPFFYLQPSTSIFHLQPRTSIFHLQVSYPTSIFSSSPTSIPNLEPPFFISNLHPQSRTFIFHLQPPPSIFHLQPRTSIFHLQFPYLPPFSKFHFHSRTCAASTIDMRSVISSQTRIQNHSIGFSPSRTKQKALTLTLDISTKLAFAHVIYTMSYVTSHSDSATKNNNICSSSSNTRKLFNMDDDTNNVVADIDINKTKQIERRYEEYRRKRKRPCKAPVIPTMESTTGDTATASHGFISVIGRRRVMEDAIKVIPRFMAAEKQPCGYDFFAVYDGHGGMTVANACRDRLHLLLAEEVKEGGDQGLDWCKAMYSCFMKMDREIGVGGGCSGDVDANNVGSTAAVVVVGKEEIVVANCGDSRAVLCSGGVAVALSRDHKPDLPDERERIEAAGGRVINWNGSRVLGILATSRSIGDHCMKPFVISQPEINVHGRTKSDEFVVVASDGLWDVVSNSFVCEVVKSCLQGHMRRNNSDNVREDLSIKGYAAEAAAILAELAMAKGSKDNISVIVIQLNNTNI 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1061g00001 553 CDD PP2Cc 270 548 IPR001932 -
Vivi1061g00001 553 Gene3D - 265 552 IPR036457 -
Vivi1061g00001 553 Pfam Protein phosphatase 2C 271 541 IPR001932 -
Vivi1061g00001 553 ProSitePatterns PPM-type phosphatase domain signature. 305 313 IPR000222 GO:0043169
Vivi1061g00001 553 SUPERFAMILY PP2C-like 266 550 IPR036457 -
Vivi1061g00001 553 ProSiteProfiles PPM-type phosphatase domain profile. 270 548 IPR001932 -
Vivi1061g00001 553 SMART PP2C_4 260 546 IPR001932 -
Vivi1061g00001 553 FunFam Protein phosphatase 2C 51 263 553 - -
Vivi1061g00001 553 PANTHER PROTEIN PHOSPHATASE 237 547 IPR015655 GO:0004722|GO:0006470
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1061g00001 265 548 PP2C-type Phosphatase Gene Family AT2G29380 46.599 9.55e-81 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1061g00001 K14497 - gmx:100813248 428.713