Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1056g00012 ATGGTCAAATGTGCAAACCTAACAAAGCTAACCTCCGCATTCAAAAGATGGCCTTCATTGACCAAACTAAGCTTCATGTCTTCTACCTCCAAGCAACATGAACAGAAACCAAAGCTTCATGTTGTGTATGCCGGAAGGTCTCGGCGCCGATATCTCGTGAACTCGAAGGTTTTTCAGCACCCGGTTTTTCAGGAGCTGGTGGATAGGTCTTGCTGTGAAGGTGTATGTGAGGATGGTGTTGTGGTTGTTTCTTGTGAAGTTGTTTTGTTTGAACATTTGGTGTGGATGCTTGAGAGTGCTGAAAGTGATGAGACACAGTTGGGATCCATGGATGAGCTTGTTGAATTCTACCATTGA 357 0.4454 MVKCANLTKLTSAFKRWPSLTKLSFMSSTSKQHEQKPKLHVVYAGRSRRRYLVNSKVFQHPVFQELVDRSCCEGVCEDGVVVVSCEVVLFEHLVWMLESAESDETQLGSMDELVEFYH 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1056g00012 118 PANTHER EXPRESSED PROTEIN 3 117 - -
Vivi1056g00012 118 Pfam Auxin responsive protein 20 97 IPR003676 GO:0009733
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1056g00012 3 105 Calmodulin-binding Proteins AT4G34750 28.571 1.86e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1056g00012 - - vvo:131639316 150.599