Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1056g00011 ATGCACGTGTTTACTCCCTCACTTCACATCATCATCATCACTCTTTTCAACAATCTCTCCTTTATAACCAAACTTTCTCACCTCATCTTCTCATCACATTTTCACTTTCTCAGTGACACATTTCATCAAACACCTTCTCTCTCTCTCTCTCCCAAAATGGCCAAGCTTGCAAAACTAACAAAACTCAAATCAGCCATCAAAAGATGGCCTTCGTTAACCAAATTATCCCGCAACAGCAGCTCTGTCTCTTCCTCCTCCAACAAACACGAACAGGAACAACAACTTCATGCTGTTTACGTCGGAAAGTCGCGGCGGCGGTATCTTGTGAACTCTGAAGTTGTTCAGCATCCTGTTTTTCAGGAGCTGGTGGATAGGTCTTGTTGTGAAGATGGTGTTGTGGTTGTTTCTTGTGAGGTTGTTTTGTTTGAACATTTGTTGTGGATGCTTGAGAGTGGTGGAAATGAGACACAATTGGGTTCCATGGATGAACTTGTTGAATTCTACAATTGTGGTGCATGTTAA 522 0.4215 MHVFTPSLHIIIITLFNNLSFITKLSHLIFSSHFHFLSDTFHQTPSLSLSPKMAKLAKLTKLKSAIKRWPSLTKLSRNSSSVSSSSNKHEQEQQLHAVYVGKSRRRYLVNSEVVQHPVFQELVDRSCCEDGVVVVSCEVVLFEHLLWMLESGGNETQLGSMDELVEFYNCGAC 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1056g00011 173 Pfam Auxin responsive protein 68 149 IPR003676 GO:0009733
Vivi1056g00011 173 PANTHER EXPRESSED PROTEIN 62 169 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1056g00011 52 149 Calmodulin-binding Proteins AT4G34750 26.923 2.82e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1056g00011 - - vvo:131639316 307.76