Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1052g00009 ATGGAGGAGGATCATGGAAAGGCAATGGAGGAGATTTTGAGAGGGTGTGAGTTTGCCAACCACCTCCAACAATTACTGCTAAACAATAATAGTAATGATTTTACAGAAACAACTTCATTTGTTCAATATCTTGTCAACAATATCATCAATTCATTTAGCAATGTTCTCTTTCTCTTGGACAAACATGATTTTTCCTGCAATTCCATTGCTCCCGTAATAAGACCTGTCGCCGAATTGGAAGAAAGTCGCAAGACTACTTCTTCTGCTACCAGAGCTCCTTACAAAAGAAGAAACACTACACGAGAGAAGGTGACAGAAACTCCCTTAGATGATGATGGTCATCAATGGAGAAAGTATGGCCAGAAAAAGATCAACAATTCTCAATACTCAAGGAACTACTACAGGTGTACTCACAAGTATGATCAAAGATGTCTAACAACAAAACAGGTGGAGAGAATTCAACAAAAACCTCCCTTATATAAAACCACCTATTATGGCCACCACACTTGTGGAAACTTGCCCAACCCTCACATCATACATGACCCTAGTGACACTAATTCCTCCGTATTACTTAGCTTCAACAACACATTCCCAGTTCCAACAAAACAAGACTGTCCCTTTTTATCATCATCATCATCTCCTTCCTCGCATGATTTTGTGAATAAAGACATACTTTTAGATGACAATAATAGCATGCTCTTCACTGATACAGCTTTTGATAACTCTAACTCTACAAGTCATGTTCCTAATCTATCATCAATACTTGAAACTGATCACGAGAATATGATAAAGTATGGTTTCATGTATCATTTTGGGGATTTTGATGATGATTTCTCTACAAGTCATGTTCCTACTCTACTATCAACATTTGAAAATGATCACAAAAATATGATGCAGTGTGGTTTCTTGTATGATTTTGGGGAGTTTGATGATGATTTATTTCTCCCTTTTGATGGGTTTTGA 963 0.3707 MEEDHGKAMEEILRGCEFANHLQQLLLNNNSNDFTETTSFVQYLVNNIINSFSNVLFLLDKHDFSCNSIAPVIRPVAELEESRKTTSSATRAPYKRRNTTREKVTETPLDDDGHQWRKYGQKKINNSQYSRNYYRCTHKYDQRCLTTKQVERIQQKPPLYKTTYYGHHTCGNLPNPHIIHDPSDTNSSVLLSFNNTFPVPTKQDCPFLSSSSSPSSHDFVNKDILLDDNNSMLFTDTAFDNSNSTSHVPNLSSILETDHENMIKYGFMYHFGDFDDDFSTSHVPTLLSTFENDHKNMMQCGFLYDFGEFDDDLFLPFDGF 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1052g00009 320 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 10 186 IPR044810 GO:0003700
Vivi1052g00009 320 SUPERFAMILY WRKY DNA-binding domain 105 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi1052g00009 320 MobiDBLite consensus disorder prediction 95 116 - -
Vivi1052g00009 320 SMART WRKY_cls 110 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi1052g00009 320 Pfam WRKY DNA -binding domain 111 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi1052g00009 320 MobiDBLite consensus disorder prediction 81 116 - -
Vivi1052g00009 320 Gene3D WRKY domain 95 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi1052g00009 320 ProSiteProfiles WRKY domain profile. 105 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1052g00009 4 200 WRKY Transcription Factor Family AT1G66550 35.961 2.61e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi1052g00009 WRKY 5.5e-22 CL0274