Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1052g00008 ATGGCATCTAATATAGAACATGGAAAGGCAATGGAGGAGATTATGAGAGGCTATCTATTGTGGACTTGGATGAAAGTTGCAACTTGCAAAACTACTACTTTTCCTACAAGAGGACCTTACAAAAGAAGAAACACTACACTGGAAAAGGTGACTGAAACTCTCATAGATGATGATGGTCATCAATGGAGAAAGTATGGGCAAAAAAAGATCAACAATACTCAATACTCAAGGAACTACTACAGGTGTACTCACAAGTATGATCAAGGATGTCTAACAACAAAACAGGTGGAGAGAATTCAACAAAAACCACCCTTGTATAAAACCACCTATTATGGCCACCACACTTGTGGAAACTTGCCCAACCCTCACATCATACATGACCCTAGTGTCGACACTAATTCCTCCGTATTGCTTAGCTTTAACAACACATTCCCAGTTCCAACAAAACAAGACTGTCCCTTTTTATCATCATCATCTCCTTCCTCACATGATTTAGTGAATAAAGAAATACTTTTAGACGACAATAATAGCATGCTCTTCACTGATACAGCTTTTGATAACTCTAACTTTACAAGTCATGTTCCTAATCTATCATCAATACTTGAAACTGATCACGAGAATATGATAAAGTATGGTTTCATGTATGATTTTGGGGATTTTGATGATGATTTCTTTCTCCCTTTTGATGGGTTTTGA 696 0.3707 MASNIEHGKAMEEIMRGYLLWTWMKVATCKTTTFPTRGPYKRRNTTLEKVTETLIDDDGHQWRKYGQKKINNTQYSRNYYRCTHKYDQGCLTTKQVERIQQKPPLYKTTYYGHHTCGNLPNPHIIHDPSVDTNSSVLLSFNNTFPVPTKQDCPFLSSSSPSSHDLVNKEILLDDNNSMLFTDTAFDNSNFTSHVPNLSSILETDHENMIKYGFMYDFGDFDDDFFLPFDGF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1052g00008 231 SMART WRKY_cls 56 118 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi1052g00008 231 Pfam WRKY DNA -binding domain 57 116 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi1052g00008 231 SUPERFAMILY WRKY DNA-binding domain 51 117 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi1052g00008 231 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 45 129 IPR044810 GO:0003700
Vivi1052g00008 231 ProSiteProfiles WRKY domain profile. 51 114 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi1052g00008 231 Gene3D WRKY domain 42 120 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1052g00008 37 116 WRKY Transcription Factor Family AT3G56400 48.750 4.81e-24 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi1052g00008 WRKY 1.7e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1052g00008 - - vvo:131639288 441.425