Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1050g00012 ATGGGAAACAGTGAGGATGGAAAATCCCCTAAGACTGAAAGGCCTTCTTCACCTGTAACAACTGATGAGACCAATCAAATCAACCAGCCTAACATTCATGTCTATCCTGATTGGGCTGCCATGCAGGCTTATTATGGGCAAAGAGTCAACATCCCACCATACTTCAACTCAGCTGTTGCTTCTGGTCATCCTCCTCACCCATATATCTGGGGACCACCACAGCCTATGATGCATCCATATGGGCCGCCGTATGCACCATTTTATTCACATGGAGGGGTTTATACTCACCCTGCAGTTGCCATGGGGACAAATTCACATGGCCAAGGAATTCCATCTTCACCCGCTGCTGGGACTACTGCAAGCATAGAGACACCAACCAAATCACCTGGAAATACTGATCAGGGTTTAGTAAAAAAATTGAAAGGATTTGACAGGCTTGCGATGTCAATAGGCAATGGCAATGCTGAGAGTGCTGAGCATGAAGCGGAAAACCGGCTATCTCGGAGCGTGGATACTGAGGGTTCCAATGATGGAAGTGATGGCAACACTGCAGGGACCAACAGCACAAGGAAAAGAAGCCGGGACGGAACACCAACAACCACTGATGGAGAAGGGAAAACTGTGATGCAAATTAGTCCAATTTCTAAAGAGACGGAAGCTTCCACAAAGATGGTGCCAGTTACCCCAACCAGTGTTGCAGAAAAATTTGTTGGACCTGTACTTTCTTCATGTATGACCACAGCACTGGAGCTGAGGAACCCTTCAACTGTTCCCACCGGTGCTCCACAACCTTGTGGAGTATTGCCTCCCGAACCTTGGATGCAGAATGAGCGTGAGCTGAAACGAGAGAGGAGGAAACAATCAAACCGTGAATCTGCTAGAAGATCCAGGCTGAGGAAGCAGGCTGAGGCTGAAGAATTGGCACGAAGAGTTGATGCATTGACTGCTGAGAATTTGGCGCTTAAATCGGAAATAAATGAATTTGCTGAAAACTCTGAGAAGCTGAAGATAGAAAATGCTACATTAAAGGAAAAGCTGAAAAACACTCAACTGGAACAGACAGAAGAGACAATTTTGAACAGCATTGACAAGAGAGCTACACCTGTAAGTACAGAGAACTTACTATCCAGAGTTAATAATTCAAACTCTGGTGATAGAACTGCAGAGGAAGAGAATGGTTTCTGTGAGAACAAACCTAATTCCGGTGCAAAACTGCATCAACTACTTGATGCAAATCCTAGAGCTAATGCTGTGGCAGCTAGTTGA 1266 0.4566 MGNSEDGKSPKTERPSSPVTTDETNQINQPNIHVYPDWAAMQAYYGQRVNIPPYFNSAVASGHPPHPYIWGPPQPMMHPYGPPYAPFYSHGGVYTHPAVAMGTNSHGQGIPSSPAAGTTASIETPTKSPGNTDQGLVKKLKGFDRLAMSIGNGNAESAEHEAENRLSRSVDTEGSNDGSDGNTAGTNSTRKRSRDGTPTTTDGEGKTVMQISPISKETEASTKMVPVTPTSVAEKFVGPVLSSCMTTALELRNPSTVPTGAPQPCGVLPPEPWMQNERELKRERRKQSNRESARRSRLRKQAEAEELARRVDALTAENLALKSEINEFAENSEKLKIENATLKEKLKNTQLEQTEETILNSIDKRATPVSTENLLSRVNNSNSGDRTAEEENGFCENKPNSGAKLHQLLDANPRANAVAAS 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1050g00012 421 CDD bZIP_plant_GBF1 282 330 IPR045314 GO:0003700|GO:0006355
Vivi1050g00012 421 MobiDBLite consensus disorder prediction 370 388 - -
Vivi1050g00012 421 Coils Coil 290 352 - -
Vivi1050g00012 421 MobiDBLite consensus disorder prediction 106 133 - -
Vivi1050g00012 421 MobiDBLite consensus disorder prediction 153 226 - -
Vivi1050g00012 421 MobiDBLite consensus disorder prediction 254 303 - -
Vivi1050g00012 421 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 284 299 IPR004827 GO:0003700|GO:0006355
Vivi1050g00012 421 Pfam G-box binding protein MFMR 1 99 IPR012900 -
Vivi1050g00012 421 Pfam Disordered region downstream of MFMR 133 257 - -
Vivi1050g00012 421 Gene3D - 280 355 - -
Vivi1050g00012 421 MobiDBLite consensus disorder prediction 275 303 - -
Vivi1050g00012 421 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 279 342 IPR004827 GO:0003700|GO:0006355
Vivi1050g00012 421 MobiDBLite consensus disorder prediction 171 226 - -
Vivi1050g00012 421 MobiDBLite consensus disorder prediction 13 30 - -
Vivi1050g00012 421 SMART brlzneu 277 341 IPR004827 GO:0003700|GO:0006355
Vivi1050g00012 421 Pfam bZIP transcription factor 277 339 IPR004827 GO:0003700|GO:0006355
Vivi1050g00012 421 MobiDBLite consensus disorder prediction 370 421 - -
Vivi1050g00012 421 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 387 IPR044827 GO:0003700|GO:0006355|GO:0043565
Vivi1050g00012 421 MobiDBLite consensus disorder prediction 1 30 - -
Vivi1050g00012 421 SUPERFAMILY Leucine zipper domain 280 336 IPR046347 GO:0003700|GO:0006355
Vivi1050g00012 421 MobiDBLite consensus disorder prediction 106 136 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1050g00012 1 420 bZIP Transcription Factor Family AT2G46270 48.951 1.03e-113 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi1050g00012 MFMR_assoc 3e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1050g00012 K09060 - gmx:778133 625.55