Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1050g00009 ATGGCTCGAACGTCGCCACAGTGGCTTAGACCATATATTGAAGTGATTCGACACGCAAATAAGATGATTGAGAGGGAGACAGATTCTGTGAATGATAATCCACTTATTGATGTTTTAAGGAATAAGGCACTTCATGGAGGAAATTTACAAGGTACACGAATTGACCTTTTCATGGATACCACATGTTTAGTCATTGCTTCAACCGGGAAACTTATGTTTGCGCAATTCTCTGAGCTTGTGGATGATTTATTCAACAACAGGTTGCCTTCGAACCTAAGTGCAAGCCGCAATCAAAGTTTGGATTACGACTTCAAAGGATCAGAAATTGCAATGCCATCTTATTACTTGGAACTTCAACACCTTGCTAATCTTGTCACTACTCAAGTTCAAAGTGTCAATAAGCATACCCAAGATGTTAACTCCTTAGGCTTGATTTCATCAAGAGAAACTCCAAAAGCGGTTGAAATATTGAAAATCATGTCATTGACTTGCTTAGTTGCCTTGTGCCAAGCAATTGATCTAAGGCACATAGAGGAAAAATTGAAAAGTGTAGTCAAGAACACTGTAAGTCACGTGGCTAAAAAAATTCTCACAGTGGGTGTAATTGGTGAGTTGCATCCATCTATGTTATGTGAGAAGGATTTGTTGAGTATA 654 0.3869 MARTSPQWLRPYIEVIRHANKMIERETDSVNDNPLIDVLRNKALHGGNLQGTRIDLFMDTTCLVIASTGKLMFAQFSELVDDLFNNRLPSNLSASRNQSLDYDFKGSEIAMPSYYLELQHLANLVTTQVQSVNKHTQDVNSLGLISSRETPKAVEILKIMSLTCLVALCQAIDLRHIEEKLKSVVKNTVSHVAKKILTVGVIGELHPSMLCEKDLLSI 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1050g00009 218 Gene3D - 178 217 IPR023144 -
Vivi1050g00009 218 PANTHER HISTIDINE AMMONIA-LYASE 3 217 IPR001106 -
Vivi1050g00009 218 Gene3D Fumarase/aspartase (Central domain) 3 177 - -
Vivi1050g00009 218 Pfam Aromatic amino acid lyase 3 186 IPR001106 -
Vivi1050g00009 218 SUPERFAMILY L-aspartase-like 3 216 IPR008948 GO:0003824
Vivi1050g00009 218 Coils Coil 213 218 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1050g00009 3 218 Monolignol Biosynthesis Gene Families AT2G37040 72.222 1.48e-107 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1050g00009 K10775 - vvo:131639268 428.328