Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi104g00016 ATGGACCCCAACAACCCTATTGTTCTCAACTCTTTCAACGAAGACATAAGTAATCCTAAGTTGAAACAAAGTCCTGCAAAAAACATGGATTCTTCTTCACCTTCTCAAACTGTCACCCCTTGCCAAGTCAACCAGAGTCCTGAAAAAAAACATCAAACGTTAAAGGAGTTCGATTTCTTTAAGGATTACAATAACAATGATCATAATAAGATTGCTGTTTCTCCATCTGCTTCTACCGCTGCTGCTGTTTCTGTCGTTGACATTGATCAAACCAACATGTCGTCTTTGCTGGATTTCAAACTCAGCACCGGCACTGATCTCCGTCTCGGTCTCAATGTTCTTGCTACCAATGATGCTAGTGAACAAGATGATGATGACGTATCATCTAAATCCGATGACGAAAACACTAAGAATGAGATGGCTGTTCTTCGAGGCAAGCTTGCTCGAATGAAAAAGGAGAATCATCGATTGAGTTTGATGCTTGATGAGCTTCAAACCGATTATGATACCCTCCTGATGAATTTTGAGAAAATGATGCAGGACAAAAAGGCCGAGGAAGTTGGAGAACAGGAAGGGTTTGTTGGAAAATTTGAAAAGAAAAGGAAATTTGAGATTGGTGGAGCATTGGTTCCAAGAGATTCTTTGGAGCTTGGATTGGCTATTAATGCTGAGCCCAAGATGGATCCTGAACCCTCTTCTTCAAGAACAATAAGTTCTGATCCATTAGGATCTCCGCCCGAGAACAACATTGAAGTTGCTTCGAAGGAGTTAGTCCTAAGTAAGAATGAGAATGTTAGTGATGAAGAAAAGAAGGAGAATGGTAAAGGGATTGAAAGAGAGGAAAATCCCATTGCTCATGCTGAGAGAATTCAAAGGCCGAATCCTCCAAACTATGCTCGAAACTTTGTTGATGTTGATGCTACTTTGAGGAGAGCAAGAGTTTCCGTTAGAACAAGATCGAGAACAGATGGAAATATGGTTCCTGATGGATGCCAGTGGAGGAAGTATGGCCAGAAAATGGCGAAAGGAAACCCGAGTCCTCGTTCTTATTATAGGTGCACCATGGCTAGTGGTTGCCCGGTTAGAAAACAGGTACAAAAGAGTGTTGAAGACAAATCCGTGGTAATCACAACATACGAAGGATATCATAGCCATACTTTACCTCCAGCAGCCATGGAAATGGCACAAACAACTGCAGCAGCTGCAAGAATGCTTCTTTCCGGATCAACCTCAAGCAACAACGGACCAATGAATGCGAGTTTCCTTCGAAGAGGAACCCTTCCTGGTTCTTCAAGTCTCGCAACTATCTCATCTTCTGCTCCGTTTCCTACCATAACGCTCGACTTCACTCAACCTCCAAATCCGCTACAACTCCGAATGCTTCAAAATCAGTTGCAAGTTCCTTTGCCTCCGATGTTTAATCAGGTACCTTATAACCAATCAACCTTTTCTGGCCTACAATTGTCGCAACCAAATGTTGCTGACACAGTTTCTGCTGCCATGGCTGCTGATCCGAATTTCACTGCAGCTTTAGCAGCTGCTTTTACTTCCTTCATCGGTGCTGCGCAGCCGAACAATAACGCGACAAATAACGATGGCGGCACAGCAAGCATCAACAATGGAAATGTCACAAGTAGCAGCAATAATAATAAAGGGAAGGAATAA 1665 0.4282 MDPNNPIVLNSFNEDISNPKLKQSPAKNMDSSSPSQTVTPCQVNQSPEKKHQTLKEFDFFKDYNNNDHNKIAVSPSASTAAAVSVVDIDQTNMSSLLDFKLSTGTDLRLGLNVLATNDASEQDDDDVSSKSDDENTKNEMAVLRGKLARMKKENHRLSLMLDELQTDYDTLLMNFEKMMQDKKAEEVGEQEGFVGKFEKKRKFEIGGALVPRDSLELGLAINAEPKMDPEPSSSRTISSDPLGSPPENNIEVASKELVLSKNENVSDEEKKENGKGIEREENPIAHAERIQRPNPPNYARNFVDVDATLRRARVSVRTRSRTDGNMVPDGCQWRKYGQKMAKGNPSPRSYYRCTMASGCPVRKQVQKSVEDKSVVITTYEGYHSHTLPPAAMEMAQTTAAAARMLLSGSTSSNNGPMNASFLRRGTLPGSSSLATISSSAPFPTITLDFTQPPNPLQLRMLQNQLQVPLPPMFNQVPYNQSTFSGLQLSQPNVADTVSAAMAADPNFTAALAAAFTSFIGAAQPNNNATNNDGGTASINNGNVTSSSNNNKGKE 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi104g00016 554 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 113 537 IPR044810 GO:0003700
Vivi104g00016 554 MobiDBLite consensus disorder prediction 223 299 - -
Vivi104g00016 554 SMART WRKY_cls 327 387 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi104g00016 554 ProSiteProfiles WRKY domain profile. 322 388 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi104g00016 554 MobiDBLite consensus disorder prediction 229 245 - -
Vivi104g00016 554 MobiDBLite consensus disorder prediction 261 287 - -
Vivi104g00016 554 Coils Coil 133 181 - -
Vivi104g00016 554 SUPERFAMILY WRKY DNA-binding domain 322 388 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi104g00016 554 Gene3D WRKY domain 311 389 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi104g00016 554 MobiDBLite consensus disorder prediction 1 48 - -
Vivi104g00016 554 MobiDBLite consensus disorder prediction 119 138 - -
Vivi104g00016 554 MobiDBLite consensus disorder prediction 1 50 - -
Vivi104g00016 554 Pfam WRKY DNA -binding domain 329 385 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi104g00016 554 MobiDBLite consensus disorder prediction 530 554 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi104g00016 105 531 WRKY Transcription Factor Family AT1G62300 40.129 2.36e-84 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi104g00016 WRKY 1.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi104g00016 - - psat:127104539 709.523