Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi104g00014 ATGGAATCTTCTTCACTTTCACACACTGTCAGCCCTTTCCAAGTCAACCTTACTCCCTCCCAAAATAATCATCAAACATTAACCGAGGTTGATTACTTTAAGAATTACAACGACAATGATCGTAATAAGGTTGATGTCTCTCTATCTGCCTCTACCGCTGCTGTCTCTGTCCTTGACATTGATCATACCAACATGCCGTCTTTGTTAGATTTCAAACTAAGCATTGGCAGTGGTCTCGATCAAAATCATCTCGCTATCAATGATGCTAGTGATCAAGATGATAATGACATGTCATCTAAATCTCATGACAAAAACACTAAGAATGAGATGGCTGTTCTTCGAGGCAAACTTGCTCGAATGAAAATGGAAAATTGTCGATTGAGTTTCATGCTTGATCAGCTTCAAACACAGTATGATACCTTGCAAATACGTTTTAAGAAAATGAAGCAGGACAAGAAGGCCAAGAAAGTTGAACAACAAGAAGGGTTTGATAGAAAACTTGGAAATAAAAAGAAATTTGAGAACGATGGAGTATCAGTTTCAAGAGATTTTTTGGAGTCTGGATTGGCTATTAATGCAGATACTAGGGTGGATCCTGAACCCTCTTCTTCAAGAACAAGAAATTATGATGGATTGGGATCCACGCCTGAGAACAACATTGAAGTTGCCTCCAAAGAGTTAGTCCTAACTACGAATGGGAAAGTTAGTGATGAAGAAAAGAATGACTATGGTAAAGGAACTAAAGGAGAGGATAATCATGTTGGTCATGCTGAGAGATTTCAAAACCCGAGTCCTCTTAACTATGCTCCAAACTTTGTTAATGATGATTCAACTGATGTTGCTGCAATCTTGACGAGAGCAAGAGTTTCTATTAGAGCTAGATCAGATGGAATCATGGTATCTGATGGATGCAAGTGGAGGAAGTATGGACAGAAAATAGTGAAAGGAGACCCGAGTCCTCGTGCTTATTATAGGTGCAGCATGGTTAGGGGTTGCCCAGTTAGAAAACAGGTACAAAAGTGTGCTAAAGACCAAAAAGTGTTAATCACAACATATGAAGGCTATCATAACCATACTTTACCTCCAGCAGCAATGGAAATGGCACAAATAACTGCAGCAGCGGCAAGAATGCTTCTTTTAGAATCAACTTCAAGCAAAGATGAAACAACAAATGCAACTATTCCTGGTTCTACAAGTCTCGCAACTATCTCAACTTCTGCTCCGTTTCGGTCTATAATACTTGACTATACGCAAACTCCAAATCCTCTGCAACTCCAAATGCTTCAAAATTAG 1293 0.3921 MESSSLSHTVSPFQVNLTPSQNNHQTLTEVDYFKNYNDNDRNKVDVSLSASTAAVSVLDIDHTNMPSLLDFKLSIGSGLDQNHLAINDASDQDDNDMSSKSHDKNTKNEMAVLRGKLARMKMENCRLSFMLDQLQTQYDTLQIRFKKMKQDKKAKKVEQQEGFDRKLGNKKKFENDGVSVSRDFLESGLAINADTRVDPEPSSSRTRNYDGLGSTPENNIEVASKELVLTTNGKVSDEEKNDYGKGTKGEDNHVGHAERFQNPSPLNYAPNFVNDDSTDVAAILTRARVSIRARSDGIMVSDGCKWRKYGQKIVKGDPSPRAYYRCSMVRGCPVRKQVQKCAKDQKVLITTYEGYHNHTLPPAAMEMAQITAAAARMLLLESTSSKDETTNATIPGSTSLATISTSAPFRSIILDYTQTPNPLQLQMLQN 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi104g00014 430 MobiDBLite consensus disorder prediction 87 108 - -
Vivi104g00014 430 Coils Coil 131 151 - -
Vivi104g00014 430 SMART WRKY_cls 300 360 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi104g00014 430 ProSiteProfiles WRKY domain profile. 295 361 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi104g00014 430 Gene3D WRKY domain 285 362 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi104g00014 430 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 84 422 IPR044810 GO:0003700
Vivi104g00014 430 MobiDBLite consensus disorder prediction 1 22 - -
Vivi104g00014 430 MobiDBLite consensus disorder prediction 197 217 - -
Vivi104g00014 430 SUPERFAMILY WRKY DNA-binding domain 295 361 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi104g00014 430 Pfam WRKY DNA -binding domain 302 358 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi104g00014 430 MobiDBLite consensus disorder prediction 194 217 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi104g00014 94 419 WRKY Transcription Factor Family AT4G04450 40.351 1.58e-61 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi104g00014 WRKY 2.2e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi104g00014 - - vvo:131633150 635.565