Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi104g00012 ATGACAAACAAGAAAATGGATTCTTCTTCACTTTCACACACTGTCATCCCTTTCCAAGTCAACCTTACTCCCTCCCAAAAAAATTTTCAAACATTAACCGAGGTTGATTACTTTAAGAATTACAACGACAATGATCGCAATAAGGTTGATGTCTCTCTATCTGCCTCTACCGCTGCTGTCTCTGTCCTTGACATTGATCATACCGACATGCCGTCTTTGTTGGATTTCAAATTAAGCATTGGCAGTGGTCTCGATCAAAATCATCTCGCTACCAATGATGCTAGTGATCAAGATGATAATGATATGTCATCTAAATTCGATCACAAAAACACTAAGAATGAGATGGCTGTTCTTCGAGGCAAACTTGCTCGAATGAAAATGGAAAATTGTCGATTGAGTTTCATGCTTGATCAGCTTCAAACACAGTATGATACCTTGCAAATACGTTTTGAGAAAATGAAGCAGGACAAGAAGGTCGAGAAAGTTGAACAACAAGAAGGGTTTGATAGAAAACTTGGAAATAAAAGGAAATTTGAGAACGATGGAGTATCAGTTTCAAGAGATTTTTTGGAGTCTGGATTGGCTATTAATGTAGATAATGGGGTGGATCGTGAACCCTCTTCTTCAAGAACAAGAAATTATGATGGATTGGGATCCACGCCTGAAAACAACATTGAAGTTGCCTCCAAAGAGTTAGTCCTAACTAAGAATGGGAAAGTTAGTGATGAAGAAAAGAATGACTATGGTAAAGGAACTAAAGGAGAGGATAATCATGTTGGTCATGCTGAGAGATTTCAAAACCCGAGTCCTCTAAACTATGCTCCAAACTTTGTTAATGATGATTCAACTGATGTTGCTGCAATCATGACGAGAGCAAGAGTTTCTATTAGAGCTAGATCAGATGGAATCATGGTTTCTGATGGATGCAAGTGGAGGAAGTATGGACAGAAAATAGTGAATGGAGACCCGAGTCCTCGTGCTTATTATAGGTGCAGCATGGTTAAGGGCTGCCCAGTTAGAAAACAGGTACAAATGTGTGCTAAAGACAAAAAAGTGGTAATCACAACATATGAAGGCTATCATAACCATACTTTACCACCAGAAGCCATGGAAATGGCACAAACAACTGCTGCTGCTGCAAGAATGCTTCTTTTAGAATCAACTTCAAGCAAAGATGAAACAACAAATGCAACTATTCCTGGTTCTACAAGTCTCACAACTATCTCAACTTCTGCACCATTTCGGTCTATTACACTTGACTTTACACAAACTCCAAATCCTCTACAACTCCAAATACCTCAAAAATAG 1308 0.3876 MTNKKMDSSSLSHTVIPFQVNLTPSQKNFQTLTEVDYFKNYNDNDRNKVDVSLSASTAAVSVLDIDHTDMPSLLDFKLSIGSGLDQNHLATNDASDQDDNDMSSKFDHKNTKNEMAVLRGKLARMKMENCRLSFMLDQLQTQYDTLQIRFEKMKQDKKVEKVEQQEGFDRKLGNKRKFENDGVSVSRDFLESGLAINVDNGVDREPSSSRTRNYDGLGSTPENNIEVASKELVLTKNGKVSDEEKNDYGKGTKGEDNHVGHAERFQNPSPLNYAPNFVNDDSTDVAAIMTRARVSIRARSDGIMVSDGCKWRKYGQKIVNGDPSPRAYYRCSMVKGCPVRKQVQMCAKDKKVVITTYEGYHNHTLPPEAMEMAQTTAAAARMLLLESTSSKDETTNATIPGSTSLTTISTSAPFRSITLDFTQTPNPLQLQIPQK 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi104g00012 435 Pfam WRKY DNA -binding domain 307 363 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi104g00012 435 Gene3D WRKY domain 290 367 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi104g00012 435 SMART WRKY_cls 305 365 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi104g00012 435 Coils Coil 108 128 - -
Vivi104g00012 435 MobiDBLite consensus disorder prediction 241 272 - -
Vivi104g00012 435 MobiDBLite consensus disorder prediction 200 222 - -
Vivi104g00012 435 Coils Coil 136 156 - -
Vivi104g00012 435 MobiDBLite consensus disorder prediction 241 262 - -
Vivi104g00012 435 SUPERFAMILY WRKY DNA-binding domain 300 366 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi104g00012 435 ProSiteProfiles WRKY domain profile. 300 366 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi104g00012 435 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 95 427 IPR044810 GO:0003700
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi104g00012 99 424 WRKY Transcription Factor Family AT4G04450 39.766 3.67e-61 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi104g00012 WRKY 3.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi104g00012 - - vvo:131633150 669.077