Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi104g00008 ATGACAAACAAGAAAATGAATTCTTCTTCACTTTCACACACTGTCATCCCTTTCCAAGTCAACCTTACTCCCTCCGAAAAAAAATTTCAAACATTAACCGAGGTTGATTACTTTAAGAATTACAACGACAATGATCGCAATAAGGTTGATGTCTCTCTATCTGCCTCTACCGCTGCTGTCTCTGTCCTTGACATTGATCATACCGACATGCCGTCTTTGTTGGATTTCAAACTAAGCATTGGCAGTGGTCTCGATCAAAATCATCTCGCTACCAATGATGCTAGTGATCAAGATGATAATGATATGTCATCTAAATTCGATCACAAAAACACTAAGAATGAGATGGCTGTTCTTCAAGGCAAACTTGCTCGAATGAAAATGGAAAATTGTCGATTGAGTTTCATGCTTGATCAGCTTCAAACACAGTATGATACCTTGCAAATACGTTTTGAGAAAATGAAGCAGGACAAGAAGGCCGAGAAAGTTGAACAACAAGAAGGAACAAGAAATTATGATGGATTGGGATCCACGCCTAAGAACAACATTGAAGTTGCCTCCAAAGAGTTAGTCCTAACTAAGAATGGGAAAGTTAGTGATGAAGAAAAGAATGACTATGGTAAAGGAACTAAAGGAGAGGATAATCATGTTGGTCATGCTGAGAGATTTCAAAACCCGAGTCTTCTAAACTATGCTCCAAACTTTGTTAATGATGATTCAACTGATGTTGCTGCAATCTTGACGAGAGCAAGAGTTTCTATTAGAGCTAGATCAGATGGAATCTTGGTTTCTGATGGATGCAAGTGGAGGAAGTATGGACAGAAAATAGTGAAAGGAGAGCCGAGTCCTCGTGCTTATTATAGGTGCAGCATGGTTAGGGGTTGCCCAGTTAGAAAACAGGTACAAATGTGTGCTAAAGACAAAAAAGTGGTAATCACAACATATGAAGGCTATCATAACCATACTTTACCACCAGAAGCCATGGGAATGGCACAAACAACTGCTGCTGCTGTAAGAATGCTTCTTTTAGAATCAACTTCAAGTAAAGATGAAACAACAAATGCAACTATTCCTGGTTCTACAAGTCTCGCAACTATCTCAACTTCTGCACCATTTCGGTCAATAACACTTGACTTTACACAAACTCCAAATCCTCTACAACTCCAAATGCCTCAAAAATAG 1179 0.3902 MTNKKMNSSSLSHTVIPFQVNLTPSEKKFQTLTEVDYFKNYNDNDRNKVDVSLSASTAAVSVLDIDHTDMPSLLDFKLSIGSGLDQNHLATNDASDQDDNDMSSKFDHKNTKNEMAVLQGKLARMKMENCRLSFMLDQLQTQYDTLQIRFEKMKQDKKAEKVEQQEGTRNYDGLGSTPKNNIEVASKELVLTKNGKVSDEEKNDYGKGTKGEDNHVGHAERFQNPSLLNYAPNFVNDDSTDVAAILTRARVSIRARSDGILVSDGCKWRKYGQKIVKGEPSPRAYYRCSMVRGCPVRKQVQMCAKDKKVVITTYEGYHNHTLPPEAMGMAQTTAAAVRMLLLESTSSKDETTNATIPGSTSLATISTSAPFRSITLDFTQTPNPLQLQMPQK 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi104g00008 392 ProSiteProfiles WRKY domain profile. 257 323 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi104g00008 392 MobiDBLite consensus disorder prediction 160 179 - -
Vivi104g00008 392 SMART WRKY_cls 262 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi104g00008 392 SUPERFAMILY WRKY DNA-binding domain 257 323 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi104g00008 392 Pfam WRKY DNA -binding domain 264 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi104g00008 392 Coils Coil 108 128 - -
Vivi104g00008 392 Coils Coil 136 156 - -
Vivi104g00008 392 Gene3D WRKY domain 247 324 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi104g00008 392 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 95 384 IPR044810 GO:0003700
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi104g00008 99 380 WRKY Transcription Factor Family AT1G62300 42.053 8.96e-60 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi104g00008 WRKY 2e-22 CL0274