Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi104g00005 ATGAATAATCCTAAGTTGAAACAAAGTCCTACAAACAACAACATGGGTTCTTCACTTTCACACACTGTGACTGCTTTCCAAAATAATCATCAAATATTAACCGAGATTGATTTCTTTAAGATTTACAACAATAATAATGATAATAAGGTTGTTGTCTCTCCATCTGCCTCTACTGCTGCTCCCTCTGTCCTTGACATTGATAATATCAACATACCGTCTTTGCTGGATTTCAAACTTAACATTGGCAGTGGTCTTGATCAGAATCTTGTTGTTACCAATGATTCTAGTGACCAAGATGATGATGACATGAAATCTAAATACGATGACAAAAACACTAAGAATGAGATGGCTGTTCTTCGAGGCAAACTTGCTCGAATGAAAATGGAGAATCGTCGATTGAGTTTCATGCTTGATCAGCTTCAAACAGATTATAATAGCTTGCAAATACGTTTTGAGAAAGTGAAGCAGGACAAGAAGGCCGAACAAGTTGAACGACAAGAAGGATCTGATGGAAAACTTGAAAAGAAAAGGAAATTTGAGAACGCTGGAGCATCGGTTTCAAGAGATTTTTTGGAGTCTAGATTGGCTATTAATGCTGATACTGAGATGGATCCTGAACCCTCTTCAAGAACAAAAAGTTCTGATCGATTGAAATCCCAACAGGAGAAAAACATTAGAGCTGCATCCAAGGAGTTAGTCCTAACTAAGAATGGAAATATTAGTGATGAAGAAAATAATGACTATGGTAAAGGGACTACAAGAGGGGATAAACTTGCTGGTCATGCTGAGAGATTTCAAAGGCCGAGTCCTCTAAACTATGCTCCAAACTTTGTTAATGATGATTCAATTGATGTTGCTGCAATCATGACGAGAGCAAGAGTTTCTATTAGAACCAGATCAGATGGAATCATGGTTTCTGATGGATGCAAGTGGAGGAAGTATGGACAAAAAATAGTGAAAGGAGAGCCGAGTCCTCGTGCTTATTATAGGTGCAGCATGGTTAGGGGTTGCCCAGTTAGAAAACAGGTACAAATGTGTGCTAAAGACAAAAAAGTGGTAATCACAACATATGAAGGCTATCATAACCATACTTTACCACCAGAAGCCATGGGAATGGCACAAACAACTGCTGCCGCTGTAAGAATGCTTCTTTTAGAATCAACTTCAAGCAAAGATGAAACAACAAATGCAACTATTCCTGGTTCTACAAGTCTCGCAACTATCTCAACTTCTGCACCATTTCGGTCTATAACACTTGACTTTACACAAACTCCAAATCCTCTACAACTCCAAATGCCTCAAAAATAG 1308 0.3838 MNNPKLKQSPTNNNMGSSLSHTVTAFQNNHQILTEIDFFKIYNNNNDNKVVVSPSASTAAPSVLDIDNINIPSLLDFKLNIGSGLDQNLVVTNDSSDQDDDDMKSKYDDKNTKNEMAVLRGKLARMKMENRRLSFMLDQLQTDYNSLQIRFEKVKQDKKAEQVERQEGSDGKLEKKRKFENAGASVSRDFLESRLAINADTEMDPEPSSRTKSSDRLKSQQEKNIRAASKELVLTKNGNISDEENNDYGKGTTRGDKLAGHAERFQRPSPLNYAPNFVNDDSIDVAAIMTRARVSIRTRSDGIMVSDGCKWRKYGQKIVKGEPSPRAYYRCSMVRGCPVRKQVQMCAKDKKVVITTYEGYHNHTLPPEAMGMAQTTAAAVRMLLLESTSSKDETTNATIPGSTSLATISTSAPFRSITLDFTQTPNPLQLQMPQK 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi104g00005 435 Coils Coil 137 157 - -
Vivi104g00005 435 SMART WRKY_cls 305 365 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi104g00005 435 SUPERFAMILY WRKY DNA-binding domain 298 366 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi104g00005 435 MobiDBLite consensus disorder prediction 156 183 - -
Vivi104g00005 435 Gene3D WRKY domain 290 367 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi104g00005 435 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 91 427 IPR044810 GO:0003700
Vivi104g00005 435 MobiDBLite consensus disorder prediction 156 184 - -
Vivi104g00005 435 MobiDBLite consensus disorder prediction 196 252 - -
Vivi104g00005 435 Pfam WRKY DNA -binding domain 307 363 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi104g00005 435 ProSiteProfiles WRKY domain profile. 300 366 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi104g00005 435 MobiDBLite consensus disorder prediction 205 225 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi104g00005 100 424 WRKY Transcription Factor Family AT4G04450 39.193 4.54e-63 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi104g00005 WRKY 2.4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi104g00005 - - vvo:131633140 585.874