Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1049g00017 ATGTATCTACACAATGAAGTTGATCCTCCCATATTTCACCGGGATGTCAAGGCCAGCAACATATTATTGGACTCAAAGCTCGCTGCAAAAGTGGCAGATTTTGGACTTTCATGGCTTGCCCCAGTTCCAGATATGGAAGGCATTGTTCCTGGTCATGTATCTACAGTGGTAAAAGGGACACCGGGTTACCTTGATCCGAAGTACTTCTTAACTCACAAGTTGACCGACAAGAGTGATGTTTACAGTCTCGGTGTTGTGTTTCTTGAACTTTTGACCCGAATGCATCCTATCTCACATGGCAAAAATATTGTTAGAGAGGTCATTCTTTCATACCAAGCTGGCGTAATATTTTCAATCATCGACGAGCGAATGGGGTCAGTAACAATACTGATGTGGGATGTTGATGCAATTATGTGCATTTCTTGGAGCAGTTGTCCCGAATTGGCTTAA 450 0.4289 MYLHNEVDPPIFHRDVKASNILLDSKLAAKVADFGLSWLAPVPDMEGIVPGHVSTVVKGTPGYLDPKYFLTHKLTDKSDVYSLGVVFLELLTRMHPISHGKNIVREVILSYQAGVIFSIIDERMGSVTILMWDVDAIMCISWSSCPELA 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1049g00017 149 Pfam Protein kinase domain 2 106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1049g00017 149 PANTHER RECEPTOR-LIKE PROTEIN 55 2 121 - -
Vivi1049g00017 149 ProSiteProfiles Protein kinase domain profile. 1 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1049g00017 149 ProSitePatterns Serine/Threonine protein kinases active-site signature. 11 23 IPR008271 GO:0004672|GO:0006468
Vivi1049g00017 149 Gene3D Transferase(Phosphotransferase) domain 1 1 147 - -
Vivi1049g00017 149 SUPERFAMILY Protein kinase-like (PK-like) 2 136 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1049g00017 1 124 Receptor kinase-like Gene Family AT5G01950 73.387 8.37e-58 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Vivi1049g00017 Pkinase 2.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1049g00017 - - vvo:131595122 305.064