Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1049g00016 ATGCCAAATGGCACACTAAGGGATCACCTTTCTGTTACATCAAAAGAACCTCTGACTTTTATCACGAGATTGAAAATCGCGCTAGGGTCAGCTAAAGGTCTCATGTATCTACACAATGAAGTTGATCCTCCCATATTTCACCGGGATGTCAAGGCCAGCAACATATTATTGGACTCAAAGCTCGCTGCAAAAGTGGCAGATTTTGGACTTTCATGGCTTGCCCCAGTTCCAGATATGGAAGGCATTGTTCCTGGTCATGTATCTACAGTGGTAAAAGGGACACCGGGTTACCTTGATCCGAAGTACTTCTTAACTCACAAGTTGACCGACAAGAGTGATGTTTACAGTCTCGGTGTTGTGTTTCTTGAACTTTTGACCCGAATGCATCCTATCTCACATGGCAAAAATATTGTTAGAGAGGTCATTCTTTCATACCAAGCTGGCGTAATATTTTCAATCATCGACGAGCGAATGGGGTCAGTAACAATACTGATGTGGGATGTTGATGCAATTATGTGCATTTCTTGGAGCAGTTGTCCCGAATTGGCTTAA 552 0.4293 MPNGTLRDHLSVTSKEPLTFITRLKIALGSAKGLMYLHNEVDPPIFHRDVKASNILLDSKLAAKVADFGLSWLAPVPDMEGIVPGHVSTVVKGTPGYLDPKYFLTHKLTDKSDVYSLGVVFLELLTRMHPISHGKNIVREVILSYQAGVIFSIIDERMGSVTILMWDVDAIMCISWSSCPELA 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1049g00016 183 SUPERFAMILY Protein kinase-like (PK-like) 1 170 IPR011009 -
Vivi1049g00016 183 ProSiteProfiles Protein kinase domain profile. 1 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1049g00016 183 ProSitePatterns Serine/Threonine protein kinases active-site signature. 45 57 IPR008271 GO:0004672|GO:0006468
Vivi1049g00016 183 Pfam Protein kinase domain 1 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1049g00016 183 Gene3D Transferase(Phosphotransferase) domain 1 1 181 - -
Vivi1049g00016 183 SMART serkin_6 1 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1049g00016 183 PANTHER RECEPTOR-LIKE PROTEIN 55 1 155 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1049g00016 1 158 Receptor kinase-like Gene Family AT5G01950 70.253 3.02e-70 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Vivi1049g00016 Pkinase 1.9e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1049g00016 - - vvo:131595122 370.163