Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1047g00003 ATGGCCACCGTTACTACACAAGCTTCCGCCGCGGTTTTCCGGCCATGTGGTTTGAAATCGAGGTTTCTTGGTGGTTCTTCAGGGAAGTTGAACAGAGAAGTGGCTTTTAGGCCAGTTGGATGTTCACCTTCTGGTTCTTTTAAAGTTGAAGCTAAGAAAGGAGAGTGGTTGCCAGGTTTGGCCTCACCAGGTTACCTCACTGGAAGTCTTCCCGGAGACAACGGATTTGATCCATTGGGACTCGCGGAGGATCCAGAGAACTTGAGGTGGTTTGTTCAAGCCGAGCTAGTGAACGGGCGTTGGGCAATGTTGGGTGTTGCAGGGATGTTACTCCCTGAGGTATTCACAAGCATTGGAATCATCAATGTTCCAAAATGGTACGATGCAGGGAAAGAAGAATACTTCGCTTCATCTTCAACACTCTTCGTGATCGAGTTCATTTTGTTCCACTATGTTGAGATTAGAAGATGGCAAGACATCAAGAACCCTGGCAGTGTTAACCAAGATCCTATCTTTAAGCAATACAGCTTGCCAAAAGGCGAGGTCGGTTACCCTGGTGGGATCTTTAACCCTTTGAACTTTGCACCAACTTTGGAGGCTAAAGAGAAGGAAATTGCAAATGGACGATTGGCGATGTTGGCGTTCTTGGGATTTATAATTCAGCACAATGTGACAGGAAAAGGACCATTTGACAACCTTGTGCAGCACATTTCTGATCCATGGCACAACACCATTGTTCAAACATTAGGTGGAAACTAA 759 0.4598 MATVTTQASAAVFRPCGLKSRFLGGSSGKLNREVAFRPVGCSPSGSFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLVQHISDPWHNTIVQTLGGN 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1047g00003 252 Gene3D Chlorophyll a/b binding protein domain 63 242 - -
Vivi1047g00003 252 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 31 248 IPR001344 GO:0009765|GO:0016020
Vivi1047g00003 252 FunFam Chlorophyll a-b binding protein, chloroplastic 63 242 - -
Vivi1047g00003 252 Pfam Chlorophyll A-B binding protein 63 222 IPR022796 -
Vivi1047g00003 252 SUPERFAMILY Chlorophyll a-b binding protein 53 249 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1047g00003 38 245 Chloroplast and Mitochondria Gene Families AT3G61470 52.535 1.42e-73 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1047g00003 K08910 - pvy:116133502 474.167