Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1046g00003 ATGAATATTCAACATTTACAAGATGATGATGATGATGATGTTCCACTTCCTGGATTTAGATTCCATCCTACTGATCAAGAACTTGTCACCTTTTATCTTCGACGAAAACTCGAAAACAAACCTATTTCTATTGACCTCATCAAACAAGTTGATATCTACAAATATGATCCTTGGGATCTTCCAAAATCTAGTGTACATGGAGCAGAAAAAGAGGGTTATTTTTTTTGCAAAAGAGGGAGAAAATATAAGAACAGTATTAGGCCAAATAGAGTAACTGGATCTGGATTCTGGAAAGCAACTGGAATAGATAAAGCAATATACTCAAATGGAGGAGAAGGAAATGATTGCGTTGGACTTAAGAAAACACTTGTTTACTATCGCGGTAGCGCTGGTAAGGGCACCAAAACCGATTGGATGATGCATGAGTTTCGTCTTCCGTCTGGTACTATTGCTACCAGCGCAGATCGTGATCGTGCTAAGAATGATAATAATGATCTTTCTCATGAAGCAGAAATTTGGACATTATGTAGAATTTTCAAAAGAAATGTATCGCCGAAGAAACAACAAACATCAGAGGTGAAGCCATTAGCTAACAAGCGTCAGAGTCAGATCATTCATGAAAAGAGTAGTAGATTAAACAATATGGAGTTCGGCGCAAATCAACAAACATATATCAATTTTGGTGCAAGCCACGAGCATCGGCCTATTAATGAACATAGTTCGATCAACAATTATACCAGCGTTGATCGAATTAATCAGTTTCAAGTAGATCAGTTGAGCTCTTCTTCGGTGGCGCATCAATCTCAACAAAATAATGTAACGCAATCTTCGAATTATTGGGTTAATCAGGCTGCTAATGAGTTATTATCATTTGATAATTGGGATGAGCTTGGATCAGTTGTGAAGTTTTCTGTTGATTCACCTAGTTTGTAA 933 0.3708 MNIQHLQDDDDDDVPLPGFRFHPTDQELVTFYLRRKLENKPISIDLIKQVDIYKYDPWDLPKSSVHGAEKEGYFFCKRGRKYKNSIRPNRVTGSGFWKATGIDKAIYSNGGEGNDCVGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSGTIATSADRDRAKNDNNDLSHEAEIWTLCRIFKRNVSPKKQQTSEVKPLANKRQSQIIHEKSSRLNNMEFGANQQTYINFGASHEHRPINEHSSINNYTSVDRINQFQVDQLSSSSVAHQSQQNNVTQSSNYWVNQAANELLSFDNWDELGSVVKFSVDSPSL 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1046g00003 310 FunFam NAC domain-containing protein 35 24 184 - -
Vivi1046g00003 310 Pfam No apical meristem (NAM) protein 17 145 IPR003441 GO:0003677|GO:0006355
Vivi1046g00003 310 ProSiteProfiles NAC domain profile. 15 181 IPR003441 GO:0003677|GO:0006355
Vivi1046g00003 310 SUPERFAMILY NAC domain 16 181 IPR036093 GO:0003677|GO:0006355
Vivi1046g00003 310 Gene3D NAC domain 24 184 IPR036093 GO:0003677|GO:0006355
Vivi1046g00003 310 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 267 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1046g00003 12 242 NAC Transcription Factor Family AT5G39820 50.000 1.14e-71 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi1046g00003 NAM 1.1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1046g00003 - - gmx:100790471 398.667