Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1045g00010 ATGGATGATGAACATGAACCATTTTCAGCACTTCCATGGCTTTGGGTAACTGAAGCCCTAGCAGGTTTCAAAGAAATCCCCTTATCCACTTTACAAGGTTTGATTAATGAAGCACCTGTAAGGCGTGATGATTTTTGTGAAAATACAAAGCAATTGGTTGCTTTGAAGTGTTTGGAGGAACTTTATGCTTCGTTTTCTTCTTCAACATTGGATTCTACAGTTGAAATTGATTCTTCGCGAACTTGTGAAGATGTTCTTCAAGAAATATTGCGTGGGGTGCCTTCATCAAATCTGAAAATTGCTGGAGCAGAGCTATTGAAATGGGATGTTAACCCATTTATCACACACAAAAGAGCTGACAATGTGAAATGTCACTTAGAGAAGCTGAAAGAATCAATATTGGAAGGTACACTGCCACTTACTGATCACTTAAAAGAGAGGAGTGGATTATTCCAAACGAATCGGCCTCATACAGTATGTGTGAATGATGGTAAAAGCAATAATCATTCAGTGAAGGATGTTGGGAACTCCACTTATGCAGAAGACATGGGAGCAAAAGAAAACTCAGTGTCCTTAATATTAGAGGATGGCAACAAATCTTCGAAAGAAGATTTACCTAATAAAAAACGTTTGTCCTCTAAGAGGAATAGGGTTTACTCGGCTGATGAGCATTTAACAAGTTGCTTTAATGAAAAGCAGGCTTGTATAAATGAACGTGATGAACTCTTAAGTAAAAAAAGGATTAAACGTAGTGCATTGACAAATTTTGATTCCAAGAAAGAAAAGCAAGTTTCTCGTCTTGAAAAGGAAGTGTCAGAAAACTCGACTGAAAATGTTCTAATTTCTGAGAATGTAGGGCATCAAACCAAAAAGAAAAACAGGAAAGCTCTGAGTGATGGATCCTTAGAGGCTAGTCATAATAGGTGCTTTGCTTCAAATTTGTGTCTGTCAAGTGGTCAAAATGAAGCCTTTCATGCTGAATCAGATATTGCCTTTAAGGCAACTTTGACGCCTCAGCAGAAAACTTCTGGAGGTAAACCCCTGTCTGAACATGAACCAGATTTGCAACTTAAAGATTTAAATTGTTCCCAGCAGACTGCTAGTAGTGTTAAAGCTCAAGATGATACTGATAATGGCTGTGGGATAGAGATACCAGGTGATACAGTTGCGTACCAAGGTGAAAAGATTAATCTCGTAATGAAAAAGCACAAAAAGAGAAGTCTTGATACAAAGTGTAGCGAAGGTGGTCAATTACTGGTCTGTGAAGCGGTTACTGGCCCATTATTGGTTCCTGAAAGTTGTATTGGTATGACGACCAACATTTATCCTCAGCATACATCTGGAGTTGATCCTTGCCATAAATTTATAGATGAAACTAATGATACTGTAGATGTTGAACCCATTCGAACATATGATGGTAATGCAAATAAAATTCAGCATATGACTAATCAATCTCAAACCCAGCAGCAGGAGCCAAATGTTGCATCTTCAAATGCCTCTCGGAAGCCAGTTGCTAGTGACAAAGCTGTAGTTGATACTGTCAATGATTGTGGAGCAGAGTTATCAAATGATAGTGATGAGCATCACAACGAAAAGATTGATCTTGGAGCCAAAAAAGATGAATTCGTGAACTCCCAGCACACTTTTGGTCAAGATTTGCCAGCAATGACTGAATCGACCAGACAAAATCTTTGCATGAAGTGCAATAAAACTGGACAATTATTGGTTTGTAAAACTACCACTTGTTCTTTGACGGTGCATAAAAACTGCCTGGGTGCATCTGCTCAGTTGGATGCTAAGGGAAACTTTTTCTGCCCATTTTGTGCTTATTCTAACACTATTTCAGAATATCTTGAAGCCAAGAAAATAGCTTCATTGGCAAGGAAAGAATTAGCTATCTTCATTACTAAGGGTATAAGAAAAGAAGCTGTAGAACGTGTTCATAAATCAGGTAGACAAGAATGTACATTTTCAAGGAAGAGTTATAAGTGCGAGCATACTCCGTTAACAGTGAATGAAGAAAATAGAGAAGATCATGCTGGTGAGCATGCAAATAAAGTTGGTAATTTTCCTTTTGAAAGAAGTCAGCAACAAGTTCCTATTTTAGCAGTTCACTCGTCATCCTTCAGAGAAAAGGAAAATGTAAAAAATGGGTTAGCAGGTGATGTAAGAGAAGAGGATGACTGTGAAATGCTGAATGCAAAGAGCTTAACTGATGAAAGAGTTGAAGACAGAGAAATGGAAACTGATCATGTAGGTGGACATGGCAATGAAAAGATTTCTTGTAAGAAGCTAAAGATTGTGTGTGCTAATGAAAGTAATGAAGAAGTTCTACAGAATATGGCAGAGCACAGTATGGATGGAACAGTAGAGCCAGTTTGGGCTCACAATACTGTAAAGGATGAACTTTCTAAAGATGAATCCAAGAAGCGTATTATTTCTAGATACTCCATGAGATTTCGTATGCATGAAGTTCAGAACAAAATCAAAGAAAGCCCTCAGATAAGACGGAAAAAAATCCCATGGACAGTTGAGGAGGAAGAGCTGATACAGGAAGGGGTCCAGAAGTTTGGCTCCCGCGACTCAAAACTACCATGGAAGAAAATTTTGGCATTCGGTTCTCACTTGTTTGAGAAGAATGACAGACTTCGTACTCCACAAGATTTAAAGGATAAATGGAAAAACATGTGCAAAGCACACTCAAAATTGAAATAA 2715 0.382 MDDEHEPFSALPWLWVTEALAGFKEIPLSTLQGLINEAPVRRDDFCENTKQLVALKCLEELYASFSSSTLDSTVEIDSSRTCEDVLQEILRGVPSSNLKIAGAELLKWDVNPFITHKRADNVKCHLEKLKESILEGTLPLTDHLKERSGLFQTNRPHTVCVNDGKSNNHSVKDVGNSTYAEDMGAKENSVSLILEDGNKSSKEDLPNKKRLSSKRNRVYSADEHLTSCFNEKQACINERDELLSKKRIKRSALTNFDSKKEKQVSRLEKEVSENSTENVLISENVGHQTKKKNRKALSDGSLEASHNRCFASNLCLSSGQNEAFHAESDIAFKATLTPQQKTSGGKPLSEHEPDLQLKDLNCSQQTASSVKAQDDTDNGCGIEIPGDTVAYQGEKINLVMKKHKKRSLDTKCSEGGQLLVCEAVTGPLLVPESCIGMTTNIYPQHTSGVDPCHKFIDETNDTVDVEPIRTYDGNANKIQHMTNQSQTQQQEPNVASSNASRKPVASDKAVVDTVNDCGAELSNDSDEHHNEKIDLGAKKDEFVNSQHTFGQDLPAMTESTRQNLCMKCNKTGQLLVCKTTTCSLTVHKNCLGASAQLDAKGNFFCPFCAYSNTISEYLEAKKIASLARKELAIFITKGIRKEAVERVHKSGRQECTFSRKSYKCEHTPLTVNEENREDHAGEHANKVGNFPFERSQQQVPILAVHSSSFREKENVKNGLAGDVREEDDCEMLNAKSLTDERVEDREMETDHVGGHGNEKISCKKLKIVCANESNEEVLQNMAEHSMDGTVEPVWAHNTVKDELSKDESKKRIISRYSMRFRMHEVQNKIKESPQIRRKKIPWTVEEEELIQEGVQKFGSRDSKLPWKKILAFGSHLFEKNDRLRTPQDLKDKWKNMCKAHSKLK 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1045g00010 904 Pfam Myb-like DNA-binding domain 841 895 IPR001005 -
Vivi1045g00010 904 Gene3D - 831 900 - -
Vivi1045g00010 904 CDD SANT_TRF 840 898 - -
Vivi1045g00010 904 SUPERFAMILY Homeodomain-like 836 898 IPR009057 -
Vivi1045g00010 904 MobiDBLite consensus disorder prediction 482 505 - -
Vivi1045g00010 904 SMART sant 838 899 IPR001005 -
Vivi1045g00010 904 SUPERFAMILY FYVE/PHD zinc finger 561 613 IPR011011 -
Vivi1045g00010 904 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 474 900 - -
Vivi1045g00010 904 SMART PHD_3 564 609 IPR001965 -
Vivi1045g00010 904 ProSitePatterns Zinc finger PHD-type signature. 565 608 IPR019786 -
Vivi1045g00010 904 MobiDBLite consensus disorder prediction 482 503 - -
Vivi1045g00010 904 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 557 617 IPR013083 -
Vivi1045g00010 904 ProSiteProfiles Myb-like domain profile. 834 897 IPR001005 -
Vivi1045g00010 904 ProSiteProfiles Zinc finger PHD-type profile. 562 611 IPR019787 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vivi1045g00010 Myb_DNA-binding 3.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1045g00010 - - cam:101508857 1270.37