LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi1042g00010	ATGGCAATTTCGGGATTCAGCGAGTTTGATTGGAAAAAGAGCGAAGATCTCTTCTTCGCTCACTCTCATTTCACCAAAACATTTACGACAACGAAGCTGGGAGGAAACTATTGCAGTGACGACAACGAAGCTGAGAGGAAACCATTCCGCAATGACGACAACGAAGCTGAGAGGAAACCATTTCACAGTGACGACGTTGATAAGGAAGAATTAGGGTTTTATACTTTGAGCACATTGGTAGCTGAAGAATTAGGGTTTTATACTCACAAACTAGTTTCTATTGCTATGTATTTGGAAATAGGTAGTAAGGGTGATAGTAATAATTCTGGTGACAATGTTGGGGATATTGTTGGCATGGGATCCGATCTATTTGGTTCATATGCAGAGGCATCTTGTGTTGCCCTTGTTGTTGCCTCCATCTCTTCTTTTGGGATCGATCATCAGTTCACTGCCATGTTGTTCCCTCTCATCATCAGTTCTGTGGGCCTCCTTGTTTGTTTGCTCACCACCTTATTTGCAACTGACTTTTTTGATATCAAGCTTGTAAAGGAAATTGAGCCAGCATTGAAAAAACAGCTTGTTATTTCAACAGTATTGATGACTATTGGAATTGCAATTGTTAGTTGGATAGCACTCCCATCTTCCTTCACCAGCTTCGATTTTGGAGAGCAGAAAGTTGTCAAGAACTGGCAGCTATTCTTGTGTGTGTCTGTTGGTCTTTGGGCAGGTCTTATCATTGGATTTGTTACTGAATACTATACCAGTAATGCATACAGCCCTGTACAAGATGTTGCTGATTCCCGCAGGACTGGTGCTGCTACCAATGTTATCTTCGGCCTTGCCTTGGGATACAAGTCTGTTATCATTCCAATTTTTGCCATTGCAATTAGTATTTCTGTTAGTTTCAGTTTTGCTGCCATGTATGGTGTTGTTGTTGCCGCTCTTGGAATGTTGAGTACCATAGCAATTGGATTAGCCATTGATGCATACGGTCCAATCAGTGACAATGCCGGAGGTATTGGTGAGATGGCTGGAATGAGTCACAGAATCCGTAAGAGAACCGATGCTCTTGATGCTGCAGGAAACACAACTGTTGCCATTGGAAAGGAAATACTACAATTTTATTTGGAAATAGGTAGTAATGGTGATAGTAATAATTCTGGTGACTTAGGCTTCTCTAAATGGACACAAGGCATACTTGGAAAACCAGGTATATGGATTCATCTTCATTTGTCCTCAAGAAATTTCTCACTTGCTGAACTAGCGCAGATGAAGTATATACTCCCTGAAGGTATAGAAATTGAAAAGGTGGTTGTTATTGATAAGAAGAGCTTGTGTATGAAGCCGGATTTGAAGATCACCTTGGTTTTTGACGTTGTAAAAGATCACTCTGAACAGTCTGCTGATATAGCTCTTGGACAATACTTCAATTCCAGTCTGCTGATATAG	1449	0.4086	MAISGFSEFDWKKSEDLFFAHSHFTKTFTTTKLGGNYCSDDNEAERKPFRNDDNEAERKPFHSDDVDKEELGFYTLSTLVAEELGFYTHKLVSIAMYLEIGSKGDSNNSGDNVGDIVGMGSDLFGSYAEASCVALVVASISSFGIDHQFTAMLFPLIISSVGLLVCLLTTLFATDFFDIKLVKEIEPALKKQLVISTVLMTIGIAIVSWIALPSSFTSFDFGEQKVVKNWQLFLCVSVGLWAGLIIGFVTEYYTSNAYSPVQDVADSRRTGAATNVIFGLALGYKSVIIPIFAIAISISVSFSFAAMYGVVVAALGMLSTIAIGLAIDAYGPISDNAGGIGEMAGMSHRIRKRTDALDAAGNTTVAIGKEILQFYLEIGSNGDSNNSGDLGFSKWTQGILGKPGIWIHLHLSSRNFSLAELAQMKYILPEGIEIEKVVVIDKKSLCMKPDLKITLVFDVVKDHSEQSADIALGQYFNSSLLI	482

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi1042g00010	482	PANTHER	K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP	107	370	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Vivi1042g00010	482	Pfam	Inorganic H+ pyrophosphatase	108	370	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Vivi1042g00010	482	SUPERFAMILY	"Winged helix" DNA-binding domain	411	466	IPR036390	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi1042g00010	106	369	Primary Pumps ATPases	AT1G15690	87.879	1.95e-161	470

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi1042g00010	K23025		-	vvo:131604375	633.639