Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1040g00004 ATGGATAACAACCACCATAATCACTACAACAATAAAACAACCTCCCAAACACGCCTTAAGCTCTTCGGCTTCCACGTCCAAGAAGACGAAACCATGCACGATATTCTTCAACAAGACTCAACAAACAAAGCCACTTCAACTTCCCCTTCAACCTCAACTTCCCCTTCAAGATCACCGGAATCTTCCGGTGTCGGTGAAGCCTTTCCACCTTCCTCCGGTGAGAGAAAATACGAGTGTCAATACTGTTGTAGAGAGTTCGCAAACTCACAAGCACTTGGTGGACACCAAAACGCGCATAAGAAAGAGCGTCAACAACTCAAACGTGCTCAGTTACAAGCTAACCGAAACGCCGCCGTTTCGTTTGTTAGAAACCCTATGATCTCCGCCTTTGCTCCTCCGCAGCACTTGCTTGCTCCGTCAGGGTCCATGATGGTTCCACCTTCCTCGTGGGTTTACGTGCCGCCGCGTTCTGCTCCTCCGCCCTTCCACGTGTCGGTTTCTCACGGCTGCGTTTTTCCGTCGGGAAACGGAAACGGAAACGGAAACACCATGATGAGTAGTAACAATAATAGTAGTAATAACTTTGCGGGTGCAGGGATGTTTCCGTGTGTTGGCGTTGTAGGGGATTCGGCGTCCGCATTGTCAACGATGCAGGTACAAGGACGGGCCCACCTGATTGATGGGCCCTGTTTGAGTAGGTTCAGTGGGCCCAATTTTGATGATTCATTGGGCTTGGATTTGCATCTTAGTCTTGCGCCAGCTGCGGCTCGGTCTTACGGCTCGGCTCAGCTTGGTTATTCTAGATGCTCCCCTTAG 816 0.5037 MDNNHHNHYNNKTTSQTRLKLFGFHVQEDETMHDILQQDSTNKATSTSPSTSTSPSRSPESSGVGEAFPPSSGERKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQANRNAAVSFVRNPMISAFAPPQHLLAPSGSMMVPPSSWVYVPPRSAPPPFHVSVSHGCVFPSGNGNGNGNTMMSSNNNSSNNFAGAGMFPCVGVVGDSASALSTMQVQGRAHLIDGPCLSRFSGPNFDDSLGLDLHLSLAPAAARSYGSAQLGYSRCSP 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1040g00004 271 ProSiteProfiles Zinc finger C2H2 type domain profile. 77 104 IPR013087 -
Vivi1040g00004 271 ProSitePatterns Zinc finger C2H2 type domain signature. 79 99 IPR013087 -
Vivi1040g00004 271 MobiDBLite consensus disorder prediction 35 72 - -
Vivi1040g00004 271 SUPERFAMILY beta-beta-alpha zinc fingers 73 104 IPR036236 -
Vivi1040g00004 271 PANTHER ZINC FINGER PROTEIN 5 5 255 IPR044299 GO:0010090
Vivi1040g00004 271 Gene3D Classic Zinc Finger 66 125 - -
Vivi1040g00004 271 FunFam Zinc finger protein 6 69 127 - -
Vivi1040g00004 271 MobiDBLite consensus disorder prediction 37 61 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1040g00004 9 254 C2H2 Transcription Factor Family AT1G68360 46.512 1.01e-52 170