Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1031g00002 ATGGCTGCAATGATTGTGGGAAACCTTGAATGCAAGAAATTGAGAAAACTTCCAAATGGGCGTGAAGTGGTAGTGAAAAGGCTTTTTGAATACGGCGTTAATAAAGAACAACAATTTCTTAACGAAATAAATATACTAGCAAGAACTGATCATCCCAATATCATCTTGGTATATGGTTGCACATCACTCAAAAGTCGTCGAGCTTTGGTTGTCTACGAGTATGTTCCTAATGGATTTTTGAGTGATCATCTTCAAGGTGACAAAGCAACACCTAATAAACTTCCTTGGAACATTAGGATGAGGATTACCATGGAGACAGCAGGTGCATTGAACCATCTTCATGCTTCTGATATCATTCATAGGGATATTAAAACGAGTAATATTCTCTTAGATGCCGAATACCATGTTAAAGTAGCTGATTTTGGACTTTCGCGCCATTTTCCTAATGATCAAAGTCGTGTTTTAACAATTCCACAAGGGACATATGTAGATCCCGAGTACAATCGAACTAATGCACTTACTTATAAAAGTGATATGTTCTGTTTTGGAGTGGTGTTGATTGAGCTTATAACATCTTTGCGTGCTTATGATCACAACAGAAAGGATGATGTGTCAATCTGTATGACATGGCTATTAACAGAACTCAAAATCAAACTTTGCATGATATTGTGGATCATACCCTCGGTTTTGATATAA 696 0.3693 MAAMIVGNLECKKLRKLPNGREVVVKRLFEYGVNKEQQFLNEINILARTDHPNIILVYGCTSLKSRRALVVYEYVPNGFLSDHLQGDKATPNKLPWNIRMRITMETAGALNHLHASDIIHRDIKTSNILLDAEYHVKVADFGLSRHFPNDQSRVLTIPQGTYVDPEYNRTNALTYKSDMFCFGVVLIELITSLRAYDHNRKDDVSICMTWLLTELKIKLCMILWIIPSVLI 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1031g00002 231 SUPERFAMILY Protein kinase-like (PK-like) 13 212 IPR011009 -
Vivi1031g00002 231 Pfam Protein kinase domain 11 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1031g00002 231 ProSiteProfiles Protein kinase domain profile. 1 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1031g00002 231 SMART serkin_6 4 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1031g00002 231 Gene3D Transferase(Phosphotransferase) domain 1 7 218 - -
Vivi1031g00002 231 ProSitePatterns Serine/Threonine protein kinases active-site signature. 118 130 IPR008271 GO:0004672|GO:0006468
Vivi1031g00002 231 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 16 203 IPR044652 GO:0004672
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1031g00002 16 200 Receptor kinase-like Gene Family AT1G25390 57.143 3.04e-65 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Vivi1031g00002 Pkinase 2.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1031g00002 - - vvo:131639044 470.7