Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1031g00001 ATGGAAATGATGTCTCAAAATTTTTACATCCTTCATATAAATCAATCCTCTCAAGTTTTGAGGATTGCTAGAGACGATTTATGGGGTTTTCTTCTTGGAAATGCGTTTTCTTGTCCCAAACATTATACTAATGTGGAAATAGATTCTCATTTCATCCATTACACATCCAACAATGAGATGTATACGATATTGTATGAGTGTGGTCCTCTTCCAAATTCATTCTTTACTCCCTCGTTTCAAATTTCTTTTGAAGTAATCGGTTGTTATATGGAGGGAAAATTTCATAGTACATACGTAGTATCAAGTTCTAAATTGACTGATTTCAATGCGGTGAACTGCAAGAATAGTATCACAGTTCCTGGAAAAAAGAATTCTTTGCCAAACAAATCATGTGTTATGGAGGGTATTTTAGTCCAAGGATTTGAGGTGAGATGGAATGGTGTTGGGGAAGACAGGTGTGATGCTTGTACAAAATATGGAGGGAGATGTGGATACAAAAAAGTAGAAAATGCATTTATTTGTCTCTCGAAGAGATCTGCCACATCAAAAGGAAAACTTCCAGATGGGCGTGAAGTGGCAGTGAAAAGGCTTTTTGAATACGGCGTCAATAAAGAACAACAATTTCTTAACGAAATAACTATACTAGCAAGAACTGATCATCCCAATCTCATCTTGGTATATGGTTGCACATCACTCAAAAGTCGTCGAGCTTTGGTTGTCTACGAGTATGTTCCTAATGGATTTTTGAGTGATCATCTTCAAGGTGGCAAAGCAACACCTAATAAACTTCCTTGGAACATTAGGATGAGGACTACCATGGAGACAGCAGGTGCATTGAACCATCTTCATGCTTCTGATATCATTCATAGGGATATTAAAACGAGTAATATTCTCTTAGATGCCGAATACCATGTTAAAGCAGCTGATTTTGGACTTTCGCGCCATATGTAG 951 0.3722 MEMMSQNFYILHINQSSQVLRIARDDLWGFLLGNAFSCPKHYTNVEIDSHFIHYTSNNEMYTILYECGPLPNSFFTPSFQISFEVIGCYMEGKFHSTYVVSSSKLTDFNAVNCKNSITVPGKKNSLPNKSCVMEGILVQGFEVRWNGVGEDRCDACTKYGGRCGYKKVENAFICLSKRSATSKGKLPDGREVAVKRLFEYGVNKEQQFLNEITILARTDHPNLILVYGCTSLKSRRALVVYEYVPNGFLSDHLQGGKATPNKLPWNIRMRTTMETAGALNHLHASDIIHRDIKTSNILLDAEYHVKAADFGLSRHM 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1031g00001 316 ProSitePatterns Serine/Threonine protein kinases active-site signature. 287 299 IPR008271 GO:0004672|GO:0006468
Vivi1031g00001 316 Pfam Protein kinase domain 187 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1031g00001 316 Pfam Wall-associated receptor kinase C-terminal 97 176 IPR032872 -
Vivi1031g00001 316 Gene3D Transferase(Phosphotransferase) domain 1 170 316 - -
Vivi1031g00001 316 SUPERFAMILY Protein kinase-like (PK-like) 182 315 IPR011009 -
Vivi1031g00001 316 ProSiteProfiles Protein kinase domain profile. 83 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1031g00001 316 SMART serkin_6 165 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1031g00001 316 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 3 179 IPR044652 GO:0004672
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1031g00001 184 314 Receptor kinase-like Gene Family AT1G25390 58.647 2.42e-45 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Vivi1031g00001 Pkinase 3.6e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1031g00001 - - vvo:131639043 655.595