Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi102g00065 ATGGCCACACTATTCCGAAAACTACGCGAATCAGCAGCATCGTTTAAACGATCCACCACCACCGCCACAACAACCACCTCCAATAATTCATCACAACGATCTCATCATCATGACGCTCCTTTGGGTTTATTCGACTCACTCCCTTCTGACATACTCCTCAAAATCATACGATTGTTGGAACCTAAACACGCCGCTAAACTCTGCATCGTTTGCAAATCATGGCGATCTCTTGTTTCCGATAACGAACTCTGGGATCATTTTCTTCAGAATCGCCAGCCTCTACACTATGATTCCATTATCTTCTCGGAAACTAAATTAACCTCTGGTTATCCTCTTCCGTTCTTTGTTACTCAAACGCCACGCGTGTTGTCGTTTAAGCATATTTATGGCCAACGGGAACGACTTCCTCCTGCTGTTATCATCGACGGTGGTTCTGGCTATTGCAAATTTGGTTGGAGCAAAGAGGAGCGTCCATTGGGGCGAACTCCTACCTTTTTGGAATTTGGTAACGTGGAGACACCGATATATACTAGGCTTCGACATTTTTTTGGGACCGTCTATGGCAGGATGAAGGTGAAACCAAGTTCTCAAGCAGTTGTTGTTTCTTTACCAATATGCCACTATGATGATACCGAATCAGCCAGAGCATCAAGACAGCAGCTTAAAGATGCAATCTGTGCTGCTCTATTTGACCTGAATGTTCCTGCTGTTTGTGCTCTCAACCAGGCAACTTTAGCTCTGTATGCTGCAAAACAAACTTCTGGAATATCTATTAATATAGGCTTTCAAGTCACATCTGTAGTTCCAATTTTAAATGGTAAAGTGATGCGAAAGGTGGGTGTGGAGGTTGTGGGGCTGGGAGCACTAAAACTTACAGGATTTCTTAGAGAGAAAATGCAACAAAACAGCTTAAACTTTGAATCTTTGTACACTGTTCGCACACTGAAAGAGAAGCTATGCTATGTGGCCTATGACTATGAAGCTGAGCTATTGAAAGATACACAAGCATCATTTGAAGCTGGTGAAGGGAGGTATACACTCTCGAAAGAGCGGTTTCAAACAGGAGAGATTTTATTCCAGCCACGTCTTGCTGGGGTTCGAGCAATGAGTTTGCACCAGGCCACAGCTCTCTGTGTGGACCATTGCTATTCTGCAGAATTAGCAGGCGGCAGTGATTGGTTTAAGACCATTGTCTTATCAGGAGGTTCTGCGTGTTTACCAGGTTTAGCAGAAAGGTTAGAGAAGGAACTTCATTCGTTACTTCCTCCTGATATGTCGAATGGAATCAGAGTCATCCCTCCTCCACATGGTGCGGATACTGCATGGTTTGGTGCAAAGCTTATTGGCAGTGTGAGCTATCCACTAAGTCTTTTAAACATTCACATTTTTCTTGCTCCACAGGACCTCACTTTTATGCTGATTAAGTTGGAACATTTTGATGATTGA 1446 0.4357 MATLFRKLRESAASFKRSTTTATTTTSNNSSQRSHHHDAPLGLFDSLPSDILLKIIRLLEPKHAAKLCIVCKSWRSLVSDNELWDHFLQNRQPLHYDSIIFSETKLTSGYPLPFFVTQTPRVLSFKHIYGQRERLPPAVIIDGGSGYCKFGWSKEERPLGRTPTFLEFGNVETPIYTRLRHFFGTVYGRMKVKPSSQAVVVSLPICHYDDTESARASRQQLKDAICAALFDLNVPAVCALNQATLALYAAKQTSGISINIGFQVTSVVPILNGKVMRKVGVEVVGLGALKLTGFLREKMQQNSLNFESLYTVRTLKEKLCYVAYDYEAELLKDTQASFEAGEGRYTLSKERFQTGEILFQPRLAGVRAMSLHQATALCVDHCYSAELAGGSDWFKTIVLSGGSACLPGLAERLEKELHSLLPPDMSNGIRVIPPPHGADTAWFGAKLIGSVSYPLSLLNIHIFLAPQDLTFMLIKLEHFDD 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi102g00065 481 Gene3D - 243 440 - -
Vivi102g00065 481 PANTHER ACTIN 181 452 IPR004000 -
Vivi102g00065 481 Pfam F-box-like 45 86 IPR001810 GO:0005515
Vivi102g00065 481 ProSiteProfiles F-box domain profile. 41 87 IPR001810 GO:0005515
Vivi102g00065 481 MobiDBLite consensus disorder prediction 15 37 - -
Vivi102g00065 481 Gene3D Actin; Chain A, domain 4 286 368 - -
Vivi102g00065 481 Gene3D - 139 452 - -
Vivi102g00065 481 SUPERFAMILY Actin-like ATPase domain 253 452 IPR043129 -
Vivi102g00065 481 MobiDBLite consensus disorder prediction 15 36 - -
Vivi102g00065 481 CDD NBD_sugar-kinase_HSP70_actin 139 283 - -
Vivi102g00065 481 SMART actin_3 136 463 IPR004000 -
Vivi102g00065 481 SUPERFAMILY F-box domain 39 99 IPR036047 GO:0005515
Vivi102g00065 481 Gene3D - 30 111 - -
Vivi102g00065 481 Pfam Actin 212 451 IPR004000 -
Vivi102g00065 481 SUPERFAMILY Actin-like ATPase domain 137 256 IPR043129 -
Vivi102g00065 481 SMART fbox_2 47 87 IPR001810 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi102g00065 185 452 Cytoskeleton Gene Families AT3G12110 30.576 1.70e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi102g00065 K16616 - gmx:100804254 678.322