Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi102g00053 ATGAGTAGCAGTGACGTAGATAAATCGTTAAAAGAAAAGGAGCCGAAGACTCCTCCAGTGGCTACATCACAGGAGCAGTCTTCAACGGCAACTGGCACTCCGGCAGTTAATCCTGAATGGGCTAACTATCAGGCATATTCTCCTATACCGCCACCTGGATACATGGCATCAAGTCCCCAAGCCCACCCATATATGTGGGGTGTCCAGGGAAATACTCCAGGCAGCAGTGAAGCTGATGGTAAACCTCATGAGGTGAAGGAAAAATTACCAATCAAAAGATCAAAAGGAAGTATGGGTAGTTTGAATATGGTTACAGGAAAAAATAATGAACTCGGTAAAACACCAGGGGCATCTGCCAATGGAATTCATTCCAAAAGTGGTGAAAGTGCAAGTGAAGGCACTAGTGAAGGAAGCGATGAAAACTCCCACAATGTTTTGCAGGATTCTCAATTGAAATCCGGGGAGAGGCAAGATTCTTTTGAAGATGAGCCGTCTCAAAATGGAAGTTCAGCGCATGCGCCTCAAAATGGGGTACTTAATACACCTCATACAGTCGTTAACCAGACTATGTCTGTCGTGCCTATGTCTGTTGCTGGTCCTCTCGCAGCAGTTCCTGGTCCCACTACTAATTTAAATATAGGAATGGATTTCTGGGGAACTCCAGCTTCATCCACCGTTCCTGCAATGCATGGAAAGGTACCTTCTACTGCAGTTGCTGGAGGGATGGTTAATGCTGGGCCTAGAGATGGTGTTCATTCACAACCTTGGCTACAGGATGAAAGGGAGCTTAAAAGACAAAGGCGGAAGCAGTCTAATAGGGAATCTGCACGTAGATCCAGGTTGCGAAAGCAGGCTGAATGTGATGAATTAGCTCAGCGTGCTGATGTTTTGAGTGAAGAAAATGCCTCTCTCCGTGCTGAACTAAGCCGGATCAAGAGTGAGCACGCGAAGGCACTTGCTGAGAATGCAGCCCTCAAGGCGAAACAGGGGGAGATACCGAGGAACGAGGATATCATGCCAGGCCAAAATGATCAGCATGTGGAGCATGTGGGTGGAGGAGACACTAAACAAAGTGGTTAG 1080 0.4704 MSSSDVDKSLKEKEPKTPPVATSQEQSSTATGTPAVNPEWANYQAYSPIPPPGYMASSPQAHPYMWGVQGNTPGSSEADGKPHEVKEKLPIKRSKGSMGSLNMVTGKNNELGKTPGASANGIHSKSGESASEGTSEGSDENSHNVLQDSQLKSGERQDSFEDEPSQNGSSAHAPQNGVLNTPHTVVNQTMSVVPMSVAGPLAAVPGPTTNLNIGMDFWGTPASSTVPAMHGKVPSTAVAGGMVNAGPRDGVHSQPWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRADVLSEENASLRAELSRIKSEHAKALAENAALKAKQGEIPRNEDIMPGQNDQHVEHVGGGDTKQSG 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi102g00053 359 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 262 314 IPR004827 GO:0003700|GO:0006355
Vivi102g00053 359 MobiDBLite consensus disorder prediction 1 15 - -
Vivi102g00053 359 MobiDBLite consensus disorder prediction 325 359 - -
Vivi102g00053 359 MobiDBLite consensus disorder prediction 237 283 - -
Vivi102g00053 359 Coils Coil 280 328 - -
Vivi102g00053 359 Gene3D - 263 318 - -
Vivi102g00053 359 MobiDBLite consensus disorder prediction 1 181 - -
Vivi102g00053 359 Pfam Disordered region downstream of MFMR 87 227 - -
Vivi102g00053 359 CDD bZIP_plant_GBF1 265 316 IPR045314 GO:0003700|GO:0006355
Vivi102g00053 359 MobiDBLite consensus disorder prediction 254 269 - -
Vivi102g00053 359 MobiDBLite consensus disorder prediction 98 153 - -
Vivi102g00053 359 MobiDBLite consensus disorder prediction 19 40 - -
Vivi102g00053 359 MobiDBLite consensus disorder prediction 79 93 - -
Vivi102g00053 359 MobiDBLite consensus disorder prediction 163 181 - -
Vivi102g00053 359 Pfam bZIP transcription factor 260 322 IPR004827 GO:0003700|GO:0006355
Vivi102g00053 359 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 267 282 IPR004827 GO:0003700|GO:0006355
Vivi102g00053 359 Pfam G-box binding protein MFMR 1 70 IPR012900 -
Vivi102g00053 359 SMART brlzneu 260 324 IPR004827 GO:0003700|GO:0006355
Vivi102g00053 359 PANTHER G-BOX-BINDING FACTOR 3-RELATED 15 337 IPR044827 GO:0003700|GO:0006355|GO:0043565
Vivi102g00053 359 SUPERFAMILY Leucine zipper domain 263 316 IPR046347 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi102g00053 1 359 bZIP Transcription Factor Family AT2G35530 51.566 3.23e-120 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi102g00053 MFMR_assoc 3.3e-55 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi102g00053 K09060 - gmx:778122 462.996