Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi102g00046 ATGGAAATGCAAAGTTTGATGCTCTTTTTGGTATTCTTATGGGTTGAAGTTCATCTTATATCTTCATATACTGATCCTCAAGATGTTTCTGCACTTAGATCTTTAAAAGATATATGGCAAAATACACCACCAAGCTGGGACAAATCAGATGACCCTTGTGGAGCACCATGGGAAGGAGTGACCTGCAGCAAATCAAGGGTTACTTCATTGAGACTGTCAACCATGGGACTGAAGGGTACATTAAGTGGAGATATTGGTGGACTTCCAGAATTAAGATCCTTGGACTTATCCTTTAATAAAGGTTTAATGGGTTCTATCTCTCCAGAATTGGGAAGCTTAAAAAACCTAAATATTCTGATTTTGGCTGGTTGCAGTTTTAGTGGCAATATTCCAGATGCATTAGGGAACCTTTCAGACCTATCTTTCTTGGCTTTGAATTCAAACAACTTCACTGGAAAAATACCTCCATCATTAGGTAAACTCTCCAAACTTTATTGGTTGGACTTGGCAGATAATCAGCTCACAGGACCTCTCCCGGTTTCGACCTCGACATCCCCGGGCTTAGACCAACTTTTACATGCTAAGCACTTCCATTTCAACAAGAACCAGCTTTCTGGTTCCATTTCTCCCAAACTTTTCCACTCTGACATGGTACTCATTCACATATTGTTAGATGGAAATGAATTAATCGGGAGTATACCTTCGACTATAGGACTAGTTCATACAGTCGAGGTTCTTCGGCTCGATAGAAATTTCTTGACAGGAGAAGTCCCTTCGAATCTCAACAAACTTAGTAACATCAATGAACTGAATTTAGCACACAACAAATTGTCCGGTCCTTTGCCGGACTTAACATCAATGGATACCCTGAATTATGTGGATCTTAGTAACAATTCATTTGATCCATCTGAAGCTCCAACTTGGTTCTCAACTCTACCCCAACTCACCACACTTATTGTGGAGTTTGGATCTCTTGAAGGTACTCTTCCATCAGAACTCTTCGGCCTTCCTCAAATACAACAAATAAAACTAAGACACAATGCATTCAACAAAACACTTGAAATGGGAGACAGCATTTGTCCTCAATTGCAGCTTGTGGATTTACAAGACAATCAAATTGCATCCGTAACCATTAGTTCACAGTACAAAAACACATTGATTCTCATAGGAAATCCAGTATGCCGTACTGGTCTCCTCTCTAATACAAATGACTGCAACCTTCAACAACAGCCGAAACAACCCTATTCGACTAGCTTGGCTAATTGCGGAGGAAGATCATGTCCACCTGATCAAAAACTCAGTCCACAGAGTTGCGAATGTGCATATCCGTATCAAGGAACATTTTATTTTAGGGCACCTTTTTTTAGAGAACTCACTAATATAACTGTTTTCCATTCACTCGAAATGAGTTTATGGGTGAAATTGAGTTTAACACCAGGCTCAGTTTCATTACAAAACCTTTTTTTCAATGGTGATGATTATCTTCAAGTGCAACTCGCACTCTTTCCACCAACAGGACAATATTTTAATAGATCAGAAGTTCAAAGAATTGGATTTTCAATGAGTAATCAAACGTACAAGCCTCCGCCTGAATTTGGACCCTATTACTTCATTGCATTTCCTTATTCTTTTCCAGATTCGCGCAGAGGAACTTCTCTTAGCCGAGGTGCTATCATTTTGATAGCGAGTGGAAGTGCAGTTCTGATTTTGTGCCTTATAGGGCTAGCTATATACGCAATCCTGCAAAAGAAGCGCGCAGAGAGAGCTATTGGAATAAGTAGACCGTTCGCATCTTGGGCACCAAGTGGCCAGGATAGTGGAGGTGCACCACAATTGAAGGGAGCAAGATGGTTCTCTTACGATGAACTCAAAAAGTGTACCGATAACTTCTCTGGAAGCAACGAGTTAGGCTTTGGTGGCTATGGCAAGGTGTACAAAGGGGTGTTCCCTGATGGAAAAATAGTTGCAATTAAAAGAGCTCAGCAAGGATCGATGCAAGGAGGACTAGAGTTCAAGAATGAAATCGAATTGCTTTCAAGAGTTCATCACAAGAATCTTGTTAGCCTTGTTGGATTCTGCTTTGAACAAGGAGAACAAATGTTGGTTTATGAATTCATCTACAATGGATCACTTAGAGAGGGTTTGTCAGGGAAATCTGGTATTCAACTTGATTGGAAGAGGAGACTCCGTATTGCTCTCGGCTCAGCTAGAGGACTTGCATACTTACACGAACTTGCCAACCCTCCCATAATCCACAGAGATGTGAAGTCAACCAATATCTTGCTGGATGAAAATTTGACTGCAAAGGTTGCGGATTTTGGCCTGTCTAAGCTTGTATCAGACAGTGACAAAAGCCATGTCTCAACTCAGGTTAAAGGAACATTGGGCTATCTAGATCCTGAATACTACATGACTCAACAACTAACCGAAAAGAGTGACGTATACAGTTTCGGTGTAGTTATGCTTGAACTGATAACATCCAAGCAACCACTTGAAAAGGGTAAGTACATCGTTCGCGAAGTTCAAACCTTAATGAATGAAAGAGATGAAGAGTTCCATGGTTTAAGCGAAGTAATGGATCCATTGGTGAGAAACACAGCCAACCAGATAGGATTTGGCAGGTTCTTAGAGTTGGCAATACAATGCGTCGAGGAATCAGCTTCAGACCGACCAACAATGAGTGACGTGGTGAAAACATTAGAAACCATATTACAGAATGATGGTTTGAACACAAATTCTACTTCTGCTTCTTCATCTGCTAATGATTTTGGAGTTTCTAAGGGTGCTGCAAAGAGACATCCTTACATTAATAATAGTTTTACTAAGAAGGATAGTGTTGATGAGAGTAATGACTTTGATTACAGTGGAGGGTACACACTTTCAACTAAAGTGGAACCTAAATAG 2904 0.4043 MEMQSLMLFLVFLWVEVHLISSYTDPQDVSALRSLKDIWQNTPPSWDKSDDPCGAPWEGVTCSKSRVTSLRLSTMGLKGTLSGDIGGLPELRSLDLSFNKGLMGSISPELGSLKNLNILILAGCSFSGNIPDALGNLSDLSFLALNSNNFTGKIPPSLGKLSKLYWLDLADNQLTGPLPVSTSTSPGLDQLLHAKHFHFNKNQLSGSISPKLFHSDMVLIHILLDGNELIGSIPSTIGLVHTVEVLRLDRNFLTGEVPSNLNKLSNINELNLAHNKLSGPLPDLTSMDTLNYVDLSNNSFDPSEAPTWFSTLPQLTTLIVEFGSLEGTLPSELFGLPQIQQIKLRHNAFNKTLEMGDSICPQLQLVDLQDNQIASVTISSQYKNTLILIGNPVCRTGLLSNTNDCNLQQQPKQPYSTSLANCGGRSCPPDQKLSPQSCECAYPYQGTFYFRAPFFRELTNITVFHSLEMSLWVKLSLTPGSVSLQNLFFNGDDYLQVQLALFPPTGQYFNRSEVQRIGFSMSNQTYKPPPEFGPYYFIAFPYSFPDSRRGTSLSRGAIILIASGSAVLILCLIGLAIYAILQKKRAERAIGISRPFASWAPSGQDSGGAPQLKGARWFSYDELKKCTDNFSGSNELGFGGYGKVYKGVFPDGKIVAIKRAQQGSMQGGLEFKNEIELLSRVHHKNLVSLVGFCFEQGEQMLVYEFIYNGSLREGLSGKSGIQLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSDKSHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSFGVVMLELITSKQPLEKGKYIVREVQTLMNERDEEFHGLSEVMDPLVRNTANQIGFGRFLELAIQCVEESASDRPTMSDVVKTLETILQNDGLNTNSTSASSSANDFGVSKGAAKRHPYINNSFTKKDSVDESNDFDYSGGYTLSTKVEPK 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi102g00046 967 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 706 917 - -
Vivi102g00046 967 ProSitePatterns Protein kinases ATP-binding region signature. 636 658 IPR017441 GO:0005524
Vivi102g00046 967 FunFam Predicted protein 186 405 - -
Vivi102g00046 967 Gene3D Ribonuclease Inhibitor 183 283 IPR032675 -
Vivi102g00046 967 SUPERFAMILY L domain-like 286 393 - -
Vivi102g00046 967 ProSiteProfiles Protein kinase domain profile. 630 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi102g00046 967 SUPERFAMILY Protein kinase-like (PK-like) 615 911 IPR011009 -
Vivi102g00046 967 Gene3D Ribonuclease Inhibitor 284 422 IPR032675 -
Vivi102g00046 967 Gene3D Transferase(Phosphotransferase) domain 1 706 925 - -
Vivi102g00046 967 CDD STKc_IRAK 636 903 - -
Vivi102g00046 967 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Vivi102g00046 967 FunFam Leucine-rich repeat protein kinase family protein 598 705 - -
Vivi102g00046 967 Gene3D Ribonuclease Inhibitor 27 182 IPR032675 -
Vivi102g00046 967 PANTHER RECEPTOR-LIKE PROTEIN 55 33 903 - -
Vivi102g00046 967 Gene3D Phosphorylase Kinase; domain 1 604 705 - -
Vivi102g00046 967 Pfam Protein tyrosine and serine/threonine kinase 634 900 IPR001245 GO:0004672|GO:0006468
Vivi102g00046 967 FunFam Leucine-rich repeat family protein 27 183 - -
Vivi102g00046 967 SMART serkin_6 630 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi102g00046 967 SUPERFAMILY L domain-like 26 300 - -
Vivi102g00046 967 ProSitePatterns Serine/Threonine protein kinases active-site signature. 750 762 IPR008271 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi102g00046 6 967 Receptor kinase-like Gene Family AT1G79620 68.246 0.0 1381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Vivi102g00046 PK_Tyr_Ser-Thr 5.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi102g00046 - - gmx:100792249 1615.9