Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi102g00040 ATGGATGAGGTTAGACCTGGAGGTAGTAGTAGTTGTAGTAGTGAAGCGGAGCAGACTCAGTCCAGAGATACGATTGTTGAAACGGCGTCGTCTTCCTCTTCCTCAGGATGGTGTCCCAGGGAGCTTGCTTTTGCTCCTTTTGTGCCGCTGGTTGAAGGCCAGCAACAGAAAGAAGATAAACGAGTTAATGCTGCTGGAAAGTCCTCAAAGTATCGTGCTATTGCTAGGAAGCCTTTGGTGGCAAGATTGACCAAGGAAATAGTTGAAACATACCAAATATGCAATCCACAGTTTAAATATTCCGAAGATCTAAATCCAAAGAGATTTTTGACCAGCCCATCTACTGGAGTGCTTAATGATGGCTATGATAATCTAAACTCAGATCTTATTCTGACAGTGAATTTGGTCTTGATCCATGTAGAGAAAAGTAGAAGATATACTGTCAAAGATCTCCTTGGTCACGGGACATTTGGACAAGTGGCCAAATGCTGGGATTCAGATACCAACAGTTTTGTTGCTGTGAAGATCATTAAAAATCAACCTGCATACTATCAACAGGCGCTGGTTGAAGTAACTATTTTAACAACGTTAAATAAGAAGTACGATCCTGAGGATAAGCATCACATTGTTCGTATATTTGATTATTTTGTATATCAACGGCATTTGTGCATATGCTTTGAACTGCTGGACACAAACCTGTATGAGCTTATCAAAATGAATCATTTTAGGGGATTGTCACTTGGTATTGTTCAGCTGTTCTCTAAGCAGATTTTATGTGGACTGGCTCTCTTAAAAGATGCTGGCATTATTCATTGTGATCTGAAGCCAGAAAACATTCTTTTATGTGCGAGTGTGAAGCCAGCAGAAATAAAGATTATTGACTTCGGATCCGCATGCATGGAAAACCGCACTGTATATTCCTATATTCAGAGTCGATACTATAGGTCTCCTGAGGTTCTTCTTGGATATCAATACACAACAGCTATTGATATGTGGTCCTTTGGGTGCATAGTGGCGGAATTATTTCTTGGATTACCATTATTCCCTGGGGCTTCAGAATTCGATCTTTTGAAAAGGATGATTGAAATAATTGGAGGACAACCACCTGATTATGTACTACGTGACGCTAAAAACACTAGTAAATTCTTTAAGTGTATCGGGAGTCTCCAGAACATAGAAATCAGTGAGGGTTCCAAAAATGGAAGTGTTTATCAAGCATTGACAGAGGAAGAATATGAAGCTAGAGATTTGAAGAAGCCATCAATTGGAAAAGAGTATTTTAAACATATGAATCTTGAAGCAATTGTTTCAAACTACCCCTACAGGAAAAACCTAGCTAAGGAAGATATTGCCAAAGAAAGTCAAATACGATTGGCTCTTATTGACTTTTTGAGAGGGCTTGTTGAATTTGACCCTGCAAAACGCTGGTCTCCCTTCCAGGCTTCCAAACACCCTTTTGTAACTGGGGAACCTTTTACTCACCCTTACAGACCATCCCCCGAGACCCCTCATATTCCTGTAGTTCAAAATATCAAGGTTGATAATCATAAAGGTGGAGGGCACTGGTTTGCTGCTGGCCTATCACCAAATGTTGCAGGAAAAAACAGAGCTTCCCTCTATAGTAGTCCACATTTTCAGATGGCGCAACATCCACCTGCAAATAGTTATGGTAGTGTTGGAAGCCATGGGAGCTATAATGATAATGTTGGGCTTGGAAGCAGCTATGGAAGTTATGGAGAGAGCAGTAACATGTTTGCTTATTATTCACCTATTGGTCCATCTGGTATGAACATGCACAGTCAGGGCGGTATGGCAATGCTTGGAAATAGTCCTGATGCTCGAAGAAGAGTTAAGTACCAACCGGGGAATGGACTGGGTGTAAGTCCATCTGGTGGGAATTTTGCTCCCTTGCCTCTTGGTGCCAGTCCATCTCAATTTACTCCACCAAGTTCATATAGTCAGATTTCAGTTGGTTCGCCGGGACATTTTGGACCTACATCTCCTGCAAGAGGAACCTCTCATGGATCCCCTTTAGGCAAGTCGGCTGCAGTTAGCCAGTTTAATAGAAGGAAAAATTGGGGACATTCTGGAAGTCCACAAACTCAAGAAACAACCTTTTCTTCACACTGGCATGGTCAATATCCTGATAGCTTAAGTCAAGGTGAGGGAACATCACAAGCTCCTGGCAGTTCACCCTCATATCTACAATCAAATATTAATCCTGGAAACTGGAAGCAGCGTGGAAGCGTATCTGCTAATCAGAACATTCCATCCATGATTATGCCTGGTTCTAATATGAACTCACAATCGACTGAATTGATTCATGACAAAATGGAGACAGGTTTTTCATTGCCTGACCCCGGAGATTGGGACCCTAATTATAGTGATGAACTACTTCTGCAAGAAGGTGGTTCAGATGAAAGTTTGACAACTGAGTTTGGCAGAAGTATGAATCTTGGTTCCAGTGAACCATGGTCTGGATTCGGAAGGAGGGACCATGTCTCCAACTCAAGTTCTCCAATAACCATGCAGAGACTAAATGGACCTGGTCAAACATTTTCTAATGTGGAGATGGGTAGCCCCCCAACACATGATCACCAAGCAGCATATATACCTTCTATCTCAAAGCCTTTTCATCTCATGCCGCATGTTTTACAAAATTCTCCAAGCCGTTTTGGACACCAATCTGTTCCAAGATTTACACATGGTAGACCTCCTCAGGGTAGTGACTGGAATCAAATTAAGATTCAGGCTCCTTCTGGTTTCAGCAATGTGGGCCCTCGTTCTCCCAGGAATGCCTCATTCACCGGCAGTATGACATGGGGGCGAAGAATGAATCCTCCTATCTCAAGCATTCCTCCTATCTCAAACATACCGCCCTCATCTCGTTCAAGAAAAGACTATGCAAGGATAGACTAG 2919 0.4224 MDEVRPGGSSSCSSEAEQTQSRDTIVETASSSSSSGWCPRELAFAPFVPLVEGQQQKEDKRVNAAGKSSKYRAIARKPLVARLTKEIVETYQICNPQFKYSEDLNPKRFLTSPSTGVLNDGYDNLNSDLILTVNLVLIHVEKSRRYTVKDLLGHGTFGQVAKCWDSDTNSFVAVKIIKNQPAYYQQALVEVTILTTLNKKYDPEDKHHIVRIFDYFVYQRHLCICFELLDTNLYELIKMNHFRGLSLGIVQLFSKQILCGLALLKDAGIIHCDLKPENILLCASVKPAEIKIIDFGSACMENRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLKRMIEIIGGQPPDYVLRDAKNTSKFFKCIGSLQNIEISEGSKNGSVYQALTEEEYEARDLKKPSIGKEYFKHMNLEAIVSNYPYRKNLAKEDIAKESQIRLALIDFLRGLVEFDPAKRWSPFQASKHPFVTGEPFTHPYRPSPETPHIPVVQNIKVDNHKGGGHWFAAGLSPNVAGKNRASLYSSPHFQMAQHPPANSYGSVGSHGSYNDNVGLGSSYGSYGESSNMFAYYSPIGPSGMNMHSQGGMAMLGNSPDARRRVKYQPGNGLGVSPSGGNFAPLPLGASPSQFTPPSSYSQISVGSPGHFGPTSPARGTSHGSPLGKSAAVSQFNRRKNWGHSGSPQTQETTFSSHWHGQYPDSLSQGEGTSQAPGSSPSYLQSNINPGNWKQRGSVSANQNIPSMIMPGSNMNSQSTELIHDKMETGFSLPDPGDWDPNYSDELLLQEGGSDESLTTEFGRSMNLGSSEPWSGFGRRDHVSNSSSPITMQRLNGPGQTFSNVEMGSPPTHDHQAAYIPSISKPFHLMPHVLQNSPSRFGHQSVPRFTHGRPPQGSDWNQIKIQAPSGFSNVGPRSPRNASFTGSMTWGRRMNPPISSIPPISNIPPSSRSRKDYARID 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi102g00040 972 PANTHER DUAL SPECIFICITY PROTEIN KINASE 16 490 - -
Vivi102g00040 972 MobiDBLite consensus disorder prediction 815 844 - -
Vivi102g00040 972 MobiDBLite consensus disorder prediction 644 661 - -
Vivi102g00040 972 MobiDBLite consensus disorder prediction 669 750 - -
Vivi102g00040 972 MobiDBLite consensus disorder prediction 919 972 - -
Vivi102g00040 972 Gene3D Phosphorylase Kinase; domain 1 110 226 - -
Vivi102g00040 972 FunFam Dual specificity tyrosine-phosphorylation-regulated kinase 1A 109 225 - -
Vivi102g00040 972 CDD PKc_YAK1 146 487 - -
Vivi102g00040 972 MobiDBLite consensus disorder prediction 636 750 - -
Vivi102g00040 972 SMART serkin_6 146 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi102g00040 972 MobiDBLite consensus disorder prediction 1 39 - -
Vivi102g00040 972 ProSiteProfiles Protein kinase domain profile. 146 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi102g00040 972 MobiDBLite consensus disorder prediction 7 38 - -
Vivi102g00040 972 Gene3D Transferase(Phosphotransferase) domain 1 227 488 - -
Vivi102g00040 972 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
Vivi102g00040 972 Pfam Protein kinase domain 146 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi102g00040 972 ProSitePatterns Protein kinases ATP-binding region signature. 152 175 IPR017441 GO:0005524
Vivi102g00040 972 SUPERFAMILY Protein kinase-like (PK-like) 140 509 IPR011009 -
Vivi102g00040 972 MobiDBLite consensus disorder prediction 919 945 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi102g00040 142 374 MAP Kinase Gene Family AT1G18150 35.081 8.82e-33 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Vivi102g00040 Pkinase 7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi102g00040 K18670 - gmx:100792777 1631.69