LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi102g00017	ATGGAGAACACAAAATCCTCAGATCAAGTTGTTCTCTTCCTTGACCAACAACAAAACCCTAAACCTTCCACAATGGACACTGAAACTCACCACAACAACAACACCACCGAACCTCATCAAGACAAACCCAAACACCCCTCTAGAGTCAAAACTCTTACCCGTCTAACCTTCTCCAAACCCAAATCCAGAATCTTTGAATACAACCATACACCTCGCAACAAACTACCTACCTTCGAAGAAGAAGAAAACACTCAACTACCTTCCTACAAAGTCTCTTCCGACGAAGAAGACGACTACGAATGGAAGGAACAAGAATCAGACGATGACGACGACAACGAAGAAGATCCAAAGTTAAACAAAAAGAAAAAGTTTAGAGTGAAGTGGAGGCTAGTTTTTGAATGGATACTATTTCTAAACATATTAACATGCTTGGTTTGTTCTCTCGTAATAAAAAAAATCAAAAACATGCATTTACTAGGGTTAGAAGTTTGGAGATGGTGCTTAATGGCAATGGTAACGTTTAGTGGCCGTTTATTTTCAAGTTGGTTAGTTAGTTTCACCGTTCTCATCATAGAAAGAAACTTCATGCTAAGAGAAAAAGTTTTATACTTCATCTACGGTTTAAGAAACAGCATTCGTAATTGTTTATGGCTAGGTCTTGTTTTATTGTCCTATTGGAGTGTAGTTTTCGATGATGTCCAAAAGAAAAACCATAAGTTCCTCAACAAGATGTTCCAAGCACTTGTTGCTGTTCTAGTAGGTGCAACAATATGGTTAGTGAAAATTGTCTTGGTGAAAATGCTAGCTTCATCTTTTCATGTGACAACATATTTTGATAGGATGAAAGAGAGTGTTTTTCATCATTATGTGTTGGACGCGTTGTCGGGTCCGGCGATGGAGTACGGGGAGGAGATATCGAAAGAGCATCATTTGACGGGGTCGAAGACGATGCCGGTGGGGGCGGGGAGGTGGAAGAAGATGAAGAGATTTGGGTCAAGGAGGATTGATATGGAAAAGCTGAGGAAACTTAGTATGGAGAGTAGTGGGTCGGTTTGGAGTGTTAAGAGGCTTGTTAACTATGTTAGGTCTTCTGGTTTGTCGACTATTTCTAGGACTGTTGATGATTTTGGGAATAAAGAGAGTGAGATTAGTAGTGAATGGGAAGCTAGAAGTTGTGCTCAGAAGATTTTTAACAATGTTGCTAAACCTGGTGCCAAGTATATTGAAGAGGTGGATCTCATGAGATATTTGAAGAGGGTTGAGATACATACCATATTTCCACTCTTTGAAGGAGCTCTTGAAACTGGAAAAATTAGCAGATCTTCCTTTAGAAATTGGGTGATTCGAGCTTATTATGAAAGAAAAGCCCTAGCACAATCACTCAATGATACAAAAACAGCAGTGCAACAACTTCACAAATTAGCAAGTGCAGTTGTGAGTGTGATAATAATAATAGTGACACTTTTGGTGATGGAAGTGGCTACAATCAAGATAATACTATTTTGTATCACACAAACAGTTTTAATAGGAGTTGCTTTTCAAGGCACTTGCAAAACTGTCTTGGAAGCTATTATCTTTGTCTTCATCATGCACCCTTTCGACATAGGAGACCGTTGTGTCATCGATGGTATTCAGATGATTGTGGAAGAGATGAATATATTGACGACTGTGTTTCTTCGATATGACAATGAGAAAATTTACTACCCTAATGCGGTCTTACTCACTAAGCCTATAAGCAATTTTTATCGAAGTCCCGAGATGCGTGATTCAATCGATTTCACCATTGATGTTACAACTCCTATAGAGACTATCATTGCACTCAAGAAATCAATACAAATGTACATTGAAAGCAAGCCAAAGTATTGGAATCCAAAGCACACTGTGATGGCAAAACAAATAGATCAAGTGGACAAGTTAAAGCTGTGTTTAAGTGTGCAACACACCATTAACCATCAAAACTATGGTGAGAGAAGCATTAGGATATCAGAACTTCTCATGGAAATGAAAAAGATGTTTGAGATTCATCGTATCAAGTACCATCTTCTTCCTCAAGAAATTCATCTCACTCAAATGAATATTGGAGATGGGAGAGCTTTGTTTCATTCATGA	2109	0.385	MENTKSSDQVVLFLDQQQNPKPSTMDTETHHNNNTTEPHQDKPKHPSRVKTLTRLTFSKPKSRIFEYNHTPRNKLPTFEEEENTQLPSYKVSSDEEDDYEWKEQESDDDDDNEEDPKLNKKKKFRVKWRLVFEWILFLNILTCLVCSLVIKKIKNMHLLGLEVWRWCLMAMVTFSGRLFSSWLVSFTVLIIERNFMLREKVLYFIYGLRNSIRNCLWLGLVLLSYWSVVFDDVQKKNHKFLNKMFQALVAVLVGATIWLVKIVLVKMLASSFHVTTYFDRMKESVFHHYVLDALSGPAMEYGEEISKEHHLTGSKTMPVGAGRWKKMKRFGSRRIDMEKLRKLSMESSGSVWSVKRLVNYVRSSGLSTISRTVDDFGNKESEISSEWEARSCAQKIFNNVAKPGAKYIEEVDLMRYLKRVEIHTIFPLFEGALETGKISRSSFRNWVIRAYYERKALAQSLNDTKTAVQQLHKLASAVVSVIIIIVTLLVMEVATIKIILFCITQTVLIGVAFQGTCKTVLEAIIFVFIMHPFDIGDRCVIDGIQMIVEEMNILTTVFLRYDNEKIYYPNAVLLTKPISNFYRSPEMRDSIDFTIDVTTPIETIIALKKSIQMYIESKPKYWNPKHTVMAKQIDQVDKLKLCLSVQHTINHQNYGERSIRISELLMEMKKMFEIHRIKYHLLPQEIHLTQMNIGDGRALFHS	702

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi102g00017	702	PANTHER	MECHANOSENSITIVE ION CHANNEL PROTEIN 5	17	691	IPR016688	-
	Vivi102g00017	702	MobiDBLite	consensus disorder prediction	1	31	-	-
	Vivi102g00017	702	FunFam	Predicted mechanosensitive ion channel	532	581	-	-
	Vivi102g00017	702	PIRSF	Memb_At2g17000	3	699	IPR016688	-
	Vivi102g00017	702	Pfam	Mechanosensitive ion channel	473	678	IPR006685	GO:0016020\|GO:0055085
	Vivi102g00017	702	Gene3D	-	532	581	IPR023408	-
	Vivi102g00017	702	MobiDBLite	consensus disorder prediction	98	113	-	-
	Vivi102g00017	702	MobiDBLite	consensus disorder prediction	32	48	-	-
	Vivi102g00017	702	SUPERFAMILY	Sm-like ribonucleoproteins	523	581	IPR010920	-
	Vivi102g00017	702	MobiDBLite	consensus disorder prediction	1	57	-	-
	Vivi102g00017	702	MobiDBLite	consensus disorder prediction	70	116	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi102g00017	18	692	Mechanosensitive Ion Channel Family	AT5G12080	41.903	0.0	552

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi102g00017	K22048		-	gmx:100813521	1082.01