Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1024g00014 ATGACCATATATACAGGCAAAGCATTATCAAGTGGAAATCAACACTACTTTTTCACCGAAGAGAAGGAAAATAGAAGCACTGAAAATGGATATTGGAAGGAAATCGGTGTCACAAAACCTATAAATAAAATGGGAATAAAGAAGTATCTTGTGTTCAACCTTGACGAAGGAAGTGAAACCAGTTGGGTAATGGAAGAGTATCATATTTCTGAATCTGAATCTTGGGAAAGACTAAATCCTATGAGAGTTGGAGCAAATGGGTTTTATGCAAAGTTTATGAAAAGCAGATGTCACAACAAGGTGCAAGCTGTTGTTATAGCGATGATGATAATGAATCAGAGGTGTCATGGTTAG 354 0.3644 MTIYTGKALSSGNQHYFFTEEKENRSTENGYWKEIGVTKPINKMGIKKYLVFNLDEGSETSWVMEEYHISESESWERLNPMRVGANGFYAKFMKSRCHNKVQAVVIAMMIMNQRCHG 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1024g00014 117 PANTHER NAC TRANSCRIPTION FACTOR 56 13 78 - -
Vivi1024g00014 117 Pfam No apical meristem (NAM) protein 10 69 IPR003441 GO:0003677|GO:0006355
Vivi1024g00014 117 Gene3D NAC domain 3 114 IPR036093 GO:0003677|GO:0006355
Vivi1024g00014 117 ProSiteProfiles NAC domain profile. 1 86 IPR003441 GO:0003677|GO:0006355
Vivi1024g00014 117 SUPERFAMILY NAC domain 7 75 IPR036093 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1024g00014 9 95 NAC Transcription Factor Family AT1G34190 34.951 9.22e-10 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi1024g00014 NAM 3.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1024g00014 - - vvo:131638977 247.669