Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1018g00017 ATGGCGAGAGAGAATGAAAATTCCGGAGGAATCCAAGTCCAAGGCATGCAATTCTCATACGACGGACTACAGCAACTCCCGCCGCTTTTCCTCGACTTCAACCTCCACGTCGCTCCTGGATCTCGATGCCTCCTCGTCGGTGCTAACGGATCCGGGAAGACGACTTTGCTGAAGATTTTGGCTGGGAAACATATGGTTGGAGGGAAAGACGTTGTGCGTGTGTTGAATTGTTCCGCTTTTCATGATACGCAGCTTGTTTGTAGTGGAGATCTTGCTTATTTGGGTGGATCTTGGAGTAAAAACGTCGGTTGCGCTGGAGACATTCCACTCCAGGGAGATTTCTCTGCAGAACATATGATATTTGGTGTCGAAGGCATTAATCCTGATAGGAGAGACAAGTTGATTGATCTGCTTGATATAGATCTGCAGTGGCGAATGCATAAGGTTTCCGATGGGCAGCGGCGTAGAGTGCAAATTTGTCTGGGTCTTCTTCATCCATACAAGGTCCTCTTGCTGGATGAGGTTACAGTTGACCTGGATGTTGTTACCCGAATGGATTTATTGGAATTCTTCAAGGAAGAATGTGAACAGAGAGAAGCTACAATTGTATATGCAACTCACATTTTTGATGGACTAGAGACATGGGCCACCCATTTGGCATACATACAAGAAGGCGAACTGAGAAGAGCAGAAAAAATATCAGATGTTAATGAGTTGAAATCTTCAGCTAATCTTCTGTCTGTTGTAGAGTCATGGCTCCGTGCTGAAACAAAGATTGAAAAGAAGAAACCCGTCATCAATACATCTAATGCTCAAGGAAATCCCTTCGCTAGCTCTCCATTCTTTTCATCCAGACACATGGCATATTATCGATAG 876 0.4475 MARENENSGGIQVQGMQFSYDGLQQLPPLFLDFNLHVAPGSRCLLVGANGSGKTTLLKILAGKHMVGGKDVVRVLNCSAFHDTQLVCSGDLAYLGGSWSKNVGCAGDIPLQGDFSAEHMIFGVEGINPDRRDKLIDLLDIDLQWRMHKVSDGQRRRVQICLGLLHPYKVLLLDEVTVDLDVVTRMDLLEFFKEECEQREATIVYATHIFDGLETWATHLAYIQEGELRRAEKISDVNELKSSANLLSVVESWLRAETKIEKKKPVINTSNAQGNPFASSPFFSSRHMAYYR 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1018g00017 291 FunFam ABC transporter I family member 21 114 286 - -
Vivi1018g00017 291 Gene3D - 9 269 IPR027417 -
Vivi1018g00017 291 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 11 248 - -
Vivi1018g00017 291 SMART AAA_5 39 225 IPR003593 GO:0016887
Vivi1018g00017 291 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 240 IPR027417 -
Vivi1018g00017 291 Pfam ABC transporter 32 65 IPR003439 GO:0005524
Vivi1018g00017 291 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 249 IPR003439 GO:0005524
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1018g00017 9 203 Calmodulin-binding Proteins AT2G36910 21.845 2.36e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1018g00017 K12608 - gmx:100788503 484.952