Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1018g00013 ATGATGAAACTAGGATTTGAAGTCCTTCATGCAAATCCAAACATGATTCATCATCCACACATGCATCAAACATGGGACTACACCATCATTACAAATGACTTACTATTACCACCTCCCATCCAAACAAATCCTTATCCAAAACCACTAACAGAAAACCACTCCTTAAACTTAGGAAACAATAATGAGATATGTGATTGGGTTGAACACATTACTAAACACTTTGTTGAAGATCACTTACCACAAAACTCTTCTGATAATCATACTATTCATAATCTTCACACTCAAACAAACACCTTAGATTTAGTTCATAATCATAGCCATAATCATAATAATAATGATTATGAAAGTGATCAAGGGTTGAATCTGATAACCCTTTTGATGGAATGTGCAGTGGCAATATCAGTTGAGAATCTTGGTGAAGCTCATAGAATGTTACTAGAGTTAACACAACTAGCTTCACCTTATAAAACATCATGTGCTGAACGTGTTGTTGCTTATTTTGCAAAGGCAATGATAAGTAGAGTCATGAATTCATGGCTTGGAGTTTGTTCTCCTTTGATTGATCATAGAACCATTCACTCTTCACTCCAAGTCTTCAACAATGTTTCCCCTTTCATCAAATTTTCACATTTTACTTCAAACCAAGCGATTCTCGAAGCCGTGAATCGTTGTAGTAGCATTCATATAATTGATTTGGATATCATGCAAGGTCTTCAATGGCCTGCTTTTTTTCACATACTCGCGACTCGGATGGAGGGTCGACCTAAGGTTCGGATGACGGGGATGGGAGCATCGATGGAGCTTCTTGTTGAGACGGGGAAAAATTTATCGAATTTCGCGAGAAGGCTTGGTTTGTGTTTGGAGTTTTACCCTCTAGCATGTAAGTTTGGTGAAGTTGTTGATGTTTCCATGTTGCAAATTAGGCCTAATGAGACACTTGCAGTGCATTGGTTGCAGCATTCTTTGTATGACTCAACTGGACCTGATTGGAAAACTTTGAGACTTCTTGAGGAATTGGAACCAAGAATCATAACTTTGGTAGAACAAGATGTTAACATTGGAGGCTCATTCTTGGACCGGTTTGTCGGTTCGTTACATTACTATTCTACACTTTTTGATTCTCTTGGATCATATTTGCATAGTGATGATTCTAACAGGAACATTGTTGAGCATGATCTTCTATCTAAAGAGATTAACAATATATTGGCGATAGGGGGGCCTAAGAGGAGTGGTGAAGAGAAGTTTAGGCTTTGGAGAAGTGAACTTGTAGGAAGAAATAGTTTTGAGCAGGTTCCAATGAGTGGTAATTCAATGGCTCAAGCACAGTTGATATTGAACATGTTTTCACCAGCTCATGGTTATAGTGTTGCTCAAGTTGATGGCATGTTGAGGCTTGGTTGGAAGGATACTAGTTTGTATACAGCTTCTTCGTGGACTTGTAGAGATTCTAGGTAG 1455 0.3835 MMKLGFEVLHANPNMIHHPHMHQTWDYTIITNDLLLPPPIQTNPYPKPLTENHSLNLGNNNEICDWVEHITKHFVEDHLPQNSSDNHTIHNLHTQTNTLDLVHNHSHNHNNNDYESDQGLNLITLLMECAVAISVENLGEAHRMLLELTQLASPYKTSCAERVVAYFAKAMISRVMNSWLGVCSPLIDHRTIHSSLQVFNNVSPFIKFSHFTSNQAILEAVNRCSSIHIIDLDIMQGLQWPAFFHILATRMEGRPKVRMTGMGASMELLVETGKNLSNFARRLGLCLEFYPLACKFGEVVDVSMLQIRPNETLAVHWLQHSLYDSTGPDWKTLRLLEELEPRIITLVEQDVNIGGSFLDRFVGSLHYYSTLFDSLGSYLHSDDSNRNIVEHDLLSKEINNILAIGGPKRSGEEKFRLWRSELVGRNSFEQVPMSGNSMAQAQLILNMFSPAHGYSVAQVDGMLRLGWKDTSLYTASSWTCRDSR 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1018g00013 484 ProSiteProfiles GRAS family profile. 113 479 IPR005202 -
Vivi1018g00013 484 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 104 475 IPR005202 -
Vivi1018g00013 484 Pfam GRAS domain family 122 479 IPR005202 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1018g00013 77 481 GRAS Transcription Factor Family AT3G54220 50.971 1.19e-132 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi1018g00013 GRAS 2.1e-101 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1018g00013 - - vvo:131638915 975.696