Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1018g00011 ATGGATTTCTCGACATCACCAAAACCTTCTTCTTCTTTCTCCTATGAATTCACCTACGACGTCTTCCTCAGTTTCAGAGGCCTTGACACTCGTTACACTTTTACCGGAAATCTCTACAAAGCTCTTTCAGATACTGGAATACGCACCTTCATAGATGATAGAGAGCTTGAAGGAGGTGATGAAATCAAACCATCACTTTCTAACGCCATCGAAGACTCTAGAATCGCTATTCTTGTATTCTCTATCAACTACGCTTCTTCTTCCTTTTGTTTAGACGAACTCGTCCACATCATTCATCACTTCACGCAAAACAATCGTTTGGTTTTGCCCGTTTTCTACGGCGTCGATCCTTCTCTCTTGCGTCATCAAATTGGAAGCTATGGTGAAGCAATAGCTAAACATAGAGACAGGTTCCAAAATGATACTGTGAATATGGAGAGGTTGCAGAAATGGAAGGTGGCTCTTAACCAAGCATCCAACTGGTCCGGCTACAATTTTCATATTGGGAATGGATATGAATACAATTTAATTGGGGAGATAGTAAAAAAAGTCACCAACAAGATTAATCGTGTTCCTTTGCACGTTGCAAATTATCCGGTTGGACTCCAGTCTCGATTACAAAAAGTGAATTCACTTTTTGATGTTAGATTTGATGATAAAGTTCAAATGTTAGGGATATATGGATTTGGAGGATTGGGAAAAACAACACTTGCCCGAGCAATTTACAATTTCATCGCCGATCAATTTGAAGTGTTATGTTTTCTTCATAACGTGAGAGAAAATTCAGCTAAGCATAGCTTGGAACATCTTCAAGAGATGATCCTTTCCAAAATGAAGGGACCGGAAATTCGGCTTGGAGATGTCAGCGAGGGGATTCCAATGTTAAGGCAAAGGCTACATCGAAAGAAGGTTTTGTTGGTTCTCGATGATGTTGATGAACTGAAGCAGTTGCAGGTTTTAGCTGGAGGACTTGATTGGTTTGGTCTTGGGAGCGTAGTAATTGTTACCACTCGAGACAAGCATTTGCTAGCAAGTCATGGGATTGAAAGAACATATGAAGTAGATAAGTTAAACCAAGTAGAAGCTCAGGAATTGTTGAGGTGGAACTCGTTTAAAAGTAACACATTTGATTCAAGTTTTGAAGGCGTTTTAAAACGCGCAGTAACTTATGCTTCTGGACTTCCATTGGCTTTAGAAGTAGTCGGTTCCAATTTGTTTGGAAAGAATATAGGACAATGGAAATCTACATTGGATTGGTACGAAAGGATTCCTGACAAAAAAATCCAAGAGATACTTAAAGTAAGTTTTGATGCTTTAGAGGAATATGAGCAAAGTGTTTTCCTTGACATCGCTTGTTGCTTCAGAGGGTATGAGTTCTTAGAGGTTGAAAATATACTCGATGCTCATTATGGTGACTGCATGAAGCATAAAATTGAAGTGTTGGTTGACAGATCTCTCATAAAGATTAATCAGGAAGGTAAACATGATACTGTGACATTACATGACTTGATCGAGGACATGGGTAAAGAAATTGTTCGTCAAGAATCATCCAAAGAGCTTGGTAAACGCAGTAGATTGTGGTTCCATAAAGATATAGTTCATGTTTTAGAAGAAAATTTGGGAACAGATAAAATTGAAATCATATATCTGGATTGCCCCTCGGTTGAAGTAGTGGTTGATTGGAAGGGAAAGAGCTTCAAGAAAATGAAAAATCTCAAAACACTTATTATTAAACAAGGTCATTTTTCTAAATGTCCTACAAGTTTTCCAAATAGTTTGAGAGTATTGGAATGGCAGAGATATCCTTCACGGTATATACCATCTAACTTTTGTCCCAAGAAACTGGCCATATGTAAGTTACCCAATAATTGCTTTACCTCATTGGAATTGGCTAGCTTTTTGAACCAGGCAAGTGAAACAAATATATTTTTCTATTCTATATATATTTATAAATCCATTTTAAGATTATTCATTTTAATTTTATTTATGCAGAAGTTAACAAATCTCAAAGTTTTGGACTTCAAAGATTCTGAATATTTAACGCATATACCTGATGTATCGGGTTTATCAAACTTAGAAGAATTTTCGATGAATAATTGTAAGAATTTACTTAAGATCCACAATTCTGTTGGGCACTTGAATAAACTCAAAGACTTGAATGCTAAGGGTTGCAGCAAGCTCCAGAGTTTTCCACCCTTGAAGTTGACCTCTCTTAAAAAATTGCAACTTTCAGGTTGTGAGAGTCTTAAGAGTTTTCCAGAAATATTGGGAGAGATGCAATATATAACCGCCATTGAATTGCATGAAACTTCCATAGAAGAATTTCCACTTTCATTTCAAAATCTCACTGGCCTTTGCCTTTTAAAAGTAGTTGGAAATGGAATGCGTAGGTTATCGAGTAACAGTCTTATGATGTCAAATTTGTGGAGTGTTCATATTGAGAATTGTCATCTATTATTTCCAAAAGAAAATGATAAATTCAGTTCTGAGATGTTTCCACAAGTGGGATCTCTAGAGCTCTTTAACTCCAACCTGTCAGATGAATTTCTTCCAAAATTTCTTACTTTATTTGCTAATGTGACAATATTAGACCTATCGGCGAATCATTTCACAATTCTTCCTGAATGCCTCAAAGAATGTGACTTTTTATATAAGCTTTGTTTAGATGATTGCAAGAATCTTCAGGAAATTAGAGGAATCCCGCCGAGTTTAAAATATTTCTCTGCAAAATCTTGCGTTTCTTTGACATCATCGTCTAGAAGCATGCTACTGAATCAGGAATTGCATGAGGCTAGAGGCACCCACTTCTATTTTTCTGCTGGAACTGAGGGAATTCCAGAGTGGTTTGAGCACCAGAGTAATGGACCTTCAATTTCGTTTTGGTCTCGTAACTACCTCCCTTCTATTGCTCTTTTACTTGTTACTAAGTTGAAGCATGGAGTTGACACATCCGATTGCTTAGTAAATATCAATCTGTTCATCAATGGCTATGGATATTATGTTGACTCTCGCGAAGTTCATGAATGGCAAGAGATTAAACCGGGCCATGCATATCTATTTGATCTGCACCTGCATAGCCGGGTTCTCAACTTTAACATGGAACATAGAAATGAGAAACTCTGGAATGTGAAATTCAAACTAGAGGAAGCACTTTCAAAAAATGAGTGGATCCATGTAGAGGTCACATACACCCATCAGATGAAGGATGCATTACTTATTGAAAGTGGAATCCACATATTCAAAGAGGAAAATAGCATGGAGAATATTCGATTTAGCAATCCTTATAAAAAGAGTAGATTTGTGGATGCAGAGACTGATATGGAGTTGGAAATTTAG 3336 0.3705 MDFSTSPKPSSSFSYEFTYDVFLSFRGLDTRYTFTGNLYKALSDTGIRTFIDDRELEGGDEIKPSLSNAIEDSRIAILVFSINYASSSFCLDELVHIIHHFTQNNRLVLPVFYGVDPSLLRHQIGSYGEAIAKHRDRFQNDTVNMERLQKWKVALNQASNWSGYNFHIGNGYEYNLIGEIVKKVTNKINRVPLHVANYPVGLQSRLQKVNSLFDVRFDDKVQMLGIYGFGGLGKTTLARAIYNFIADQFEVLCFLHNVRENSAKHSLEHLQEMILSKMKGPEIRLGDVSEGIPMLRQRLHRKKVLLVLDDVDELKQLQVLAGGLDWFGLGSVVIVTTRDKHLLASHGIERTYEVDKLNQVEAQELLRWNSFKSNTFDSSFEGVLKRAVTYASGLPLALEVVGSNLFGKNIGQWKSTLDWYERIPDKKIQEILKVSFDALEEYEQSVFLDIACCFRGYEFLEVENILDAHYGDCMKHKIEVLVDRSLIKINQEGKHDTVTLHDLIEDMGKEIVRQESSKELGKRSRLWFHKDIVHVLEENLGTDKIEIIYLDCPSVEVVVDWKGKSFKKMKNLKTLIIKQGHFSKCPTSFPNSLRVLEWQRYPSRYIPSNFCPKKLAICKLPNNCFTSLELASFLNQASETNIFFYSIYIYKSILRLFILILFMQKLTNLKVLDFKDSEYLTHIPDVSGLSNLEEFSMNNCKNLLKIHNSVGHLNKLKDLNAKGCSKLQSFPPLKLTSLKKLQLSGCESLKSFPEILGEMQYITAIELHETSIEEFPLSFQNLTGLCLLKVVGNGMRRLSSNSLMMSNLWSVHIENCHLLFPKENDKFSSEMFPQVGSLELFNSNLSDEFLPKFLTLFANVTILDLSANHFTILPECLKECDFLYKLCLDDCKNLQEIRGIPPSLKYFSAKSCVSLTSSSRSMLLNQELHEARGTHFYFSAGTEGIPEWFEHQSNGPSISFWSRNYLPSIALLLVTKLKHGVDTSDCLVNINLFINGYGYYVDSREVHEWQEIKPGHAYLFDLHLHSRVLNFNMEHRNEKLWNVKFKLEEALSKNEWIHVEVTYTHQMKDALLIESGIHIFKEENSMENIRFSNPYKKSRFVDAETDMELEI 1111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1018g00011 1111 Gene3D Ribonuclease Inhibitor 752 932 IPR032675 -
Vivi1018g00011 1111 Gene3D - 17 187 IPR035897 -
Vivi1018g00011 1111 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 164 IPR035897 -
Vivi1018g00011 1111 Gene3D - 188 352 IPR027417 -
Vivi1018g00011 1111 Gene3D Ribonuclease Inhibitor 536 751 IPR032675 -
Vivi1018g00011 1111 Pfam NB-ARC domain 218 419 IPR002182 GO:0043531
Vivi1018g00011 1111 Pfam TIR domain 19 187 IPR000157 GO:0007165
Vivi1018g00011 1111 SUPERFAMILY L domain-like 558 950 - -
Vivi1018g00011 1111 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 190 - -
Vivi1018g00011 1111 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 450 IPR027417 -
Vivi1018g00011 1111 PRINTS Disease resistance protein signature 733 749 - -
Vivi1018g00011 1111 PRINTS Disease resistance protein signature 298 312 - -
Vivi1018g00011 1111 PRINTS Disease resistance protein signature 391 405 - -
Vivi1018g00011 1111 PRINTS Disease resistance protein signature 223 238 - -
Vivi1018g00011 1111 Gene3D - 356 440 IPR042197 -
Vivi1018g00011 1111 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 762 IPR044974 GO:0006952
Vivi1018g00011 1111 SMART till_3 18 161 IPR000157 GO:0007165
Vivi1018g00011 1111 SUPERFAMILY "Winged helix" DNA-binding domain 426 537 IPR036390 -
Vivi1018g00011 1111 ProSiteProfiles TIR domain profile. 17 188 IPR000157 GO:0007165
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1018g00011 9 827 WRKY Transcription Factor Family AT4G12020 27.203 3.53e-64 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1018g00011 - - tpra:123910163 1116.68