Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1018g00008 ATGGATCATGTGATTGGTGGGAAGTTTAAACTAGGAAGGAAAATTGGGAGTGGCTCTTTTGGAGAGCTCTATTTAGCTGTTAATATACAATCTGGAGAGGAGGTGGCTGTTAAGCTGGAATCTGTGAAGACCAGGCATCCACAGCTTCACTATGAGTCAAAATTGTATATGCTTCTTCAAGGAGGAACGGGGATTCCCCACCTCAAATGGTTTGGAGTTGAGGGAGAGTATAATGTCATGGTTATTGATCTTCTTGGACCAAGTCTTGAAGATTTATTCAATTATTGTAACCGGAAATTTACATTGAAGTCAGTGTTGATGCTTGCTGATCAATTAATTAATAGAGTTGAATACATGCATTCACGAGGCTTTCTTCACCGGGACATAAAGCCAGACAATTTTTTGATGGGCCTCGGACGTAAAGCAAATCAAGTGTACGCCATTGACTACGGCCTTGCGAAAAAATATAGGGATCTTCAGACTCACAGGCACATACCATACAGGGAAAACAAGAACCTTACAGGCACAGCACGCTATGCAAGTGTCAACACTCATCTTGGAATCGAACAAAGCAGAAGGGATGATCTGGAATCCCTTGGTTATGTGCTCATGTATTTCTTAAGAGGAAGTCTTCCCTGGCAGGGACTGAAGGCTGGAAACAAAAAACAAAAATACGACAAAATCAGTGAGACAAAGGTGTCAACTCCGATAGAGGTGCTCTGTAAATCATATCCCTCTGAGTTTGTATCATACTTCCACTATTGCCGATCATTGAGGTTTGAGGACAAGCCAGATTATTCATATTTAAAGAGACTTTTCCGAGATCTATTTATCCGAGAAGGCTATCAATTTGACTATGTTTTTGACTGGACTGTATTGAAATATCCACAAGTTGGTAGCAGCAGCTCTAGAGGACGGCATGGCAATGGCAAGGCAGCTATGCAAGCAGCTACACCTGCACACAGACCGGAAAGGATCCAAGTTGGGAGAGAGATTCGAGAGAAGTTATCCGGTGCTGTTGAAGCATTCTCCTCCCATAGGAACCGCCCAAGTTCTACTCCTCATCATCATCACGGTGAACATGCCAGACATAGGACTTATGACGAGGCAGCAATGCATAAGGAGATGCACTATGCCCAACACAATACAACACGATATGGCAGCAATTCGAAAAGAGCAATGGTATCATCATCAAACAGGACGAATTCCTCAGGCGACTATACTGCCAGGATAGCCTCAAGTGGTGGGGGCCGTCCATCCGCTGCACATAGAGTTCAACCTGTTTACGAGACCAGACAAGCAGCTTTTGCGCGCAATGGATCTTTGAGAGGCCACCGTGATGATCCTCTGAGGAACTTTGAGCTCCTCGCTATCAGGAAGTAA 1383 0.4418 MDHVIGGKFKLGRKIGSGSFGELYLAVNIQSGEEVAVKLESVKTRHPQLHYESKLYMLLQGGTGIPHLKWFGVEGEYNVMVIDLLGPSLEDLFNYCNRKFTLKSVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYAIDYGLAKKYRDLQTHRHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGNKKQKYDKISETKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTVLKYPQVGSSSSRGRHGNGKAAMQAATPAHRPERIQVGREIREKLSGAVEAFSSHRNRPSSTPHHHHGEHARHRTYDEAAMHKEMHYAQHNTTRYGSNSKRAMVSSSNRTNSSGDYTARIASSGGGRPSAAHRVQPVYETRQAAFARNGSLRGHRDDPLRNFELLAIRK 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1018g00008 460 Gene3D Transferase(Phosphotransferase) domain 1 1 335 - -
Vivi1018g00008 460 CDD STKc_CK1_delta_epsilon 8 282 - -
Vivi1018g00008 460 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1018g00008 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Vivi1018g00008 460 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1018g00008 460 MobiDBLite consensus disorder prediction 300 322 - -
Vivi1018g00008 460 MobiDBLite consensus disorder prediction 343 364 - -
Vivi1018g00008 460 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1018g00008 460 FunFam Putative Casein kinase I 1 85 - -
Vivi1018g00008 460 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Vivi1018g00008 460 PANTHER CASEIN KINASE-RELATED 9 351 - -
Vivi1018g00008 460 FunFam Casein kinase 1-like protein 1 331 - -
Vivi1018g00008 460 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1018g00008 8 213 MAP Kinase Kinase Kinase AT3G06030 25.463 7.72e-13 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Vivi1018g00008 Pkinase 8.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1018g00008 K08960 - gmx:100789031 767.689