Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1010g00011 ATGGCTGCTTTTCTTCCACCTGGTGTTGTTTTCATTCCTAATGATGAGATTCTTATTGGCTATTACCTTGCCAACAAAAATAACGAAGAGCTCCATATTTTCAATGGCTCACACATGATTAAAGAGATGAACCTATATGACTCTGATCCCTTCGAATTGTCTCCCGCGTCATCCTATTCAATCTACAATGGTAGGCACTGGCACTGGTACTGTTTTACTACAAAAATTTACGAGGAAAGAAGACATTGCAAGACCGGGTTTTGGAAGAAGAAAGGAAATGTTCGTAATATTACTAATGCAGATAACATAGTTTTAGGAACTAAAACTCTCTTTGTTTTCTATCTTGGAAAATCCCCAAATGATTCAGAAAGAACTAATTGGACTATGTATGAATATGCTTTGGCAGACAATCCAATATTTGATTGCCCAATAGAGATGGACGTGGATGATGAATTTGGGCCTTTATCTGATGTTGATGAAACTGATTGTGATGAAAGTGATAACGAGCTTGAGAAATTCTATGTATGA 528 0.3674 MAAFLPPGVVFIPNDEILIGYYLANKNNEELHIFNGSHMIKEMNLYDSDPFELSPASSYSIYNGRHWHWYCFTTKIYEERRHCKTGFWKKKGNVRNITNADNIVLGTKTLFVFYLGKSPNDSERTNWTMYEYALADNPIFDCPIEMDVDDEFGPLSDVDETDCDESDNELEKFYV 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1010g00011 175 Gene3D NAC domain 14 168 IPR036093 GO:0003677|GO:0006355
Vivi1010g00011 175 ProSiteProfiles NAC domain profile. 5 175 IPR003441 GO:0003677|GO:0006355
Vivi1010g00011 175 Pfam No apical meristem (NAM) protein 6 134 IPR003441 GO:0003677|GO:0006355
Vivi1010g00011 175 PANTHER NAC TRANSCRIPTION FACTOR 56 5 147 - -
Vivi1010g00011 175 SUPERFAMILY NAC domain 3 143 IPR036093 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1010g00011 1 137 NAC Transcription Factor Family AT1G32510 36.735 2.63e-21 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi1010g00011 NAM 1.6e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1010g00011 - - vvo:131638861 343.199