Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1010g00008 ATGATTAAAGAGATGAACCTATATGACTCTAATCCCTTTGAATTGTCTCCCGCGTCCTCCTACTCAATCTACAATGGTAGGCACTGGCACTGGTATTGTTTTACTGCAAAAATTAACGAGGAAAGAAGACATTGCAAGACCGGGTTTTGGAAGAAGAAAGGAAATGTCCGTAATATTACTAATGCAGATAACGTAGTTTTAGGAACTAAAACTCTCTTTGTTTTCTATCTTGGAAAGTCCCTAAATGATTCAGAAAGAACTAATTGGACTATGTATGAATATGCTTTGGCAAACAATCCGCAGGTTGGTTTTGTTCTTTGTAGAATATTTGATTGCCCAATAGAGATTGACGTGGATAATGAATTTGGGCCTTTATCTGATGTTGATGAAACTGATTGTGATGAAAGTGATAACGTGCTTGAGAAATTCGACGTATGA 438 0.3676 MIKEMNLYDSNPFELSPASSYSIYNGRHWHWYCFTAKINEERRHCKTGFWKKKGNVRNITNADNVVLGTKTLFVFYLGKSLNDSERTNWTMYEYALANNPQVGFVLCRIFDCPIEIDVDNEFGPLSDVDETDCDESDNVLEKFDV 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1010g00008 145 Pfam No apical meristem (NAM) protein 1 96 IPR003441 GO:0003677|GO:0006355
Vivi1010g00008 145 Gene3D NAC domain 1 113 IPR036093 GO:0003677|GO:0006355
Vivi1010g00008 145 ProSiteProfiles NAC domain profile. 1 112 IPR003441 GO:0003677|GO:0006355
Vivi1010g00008 145 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 2 111 - -
Vivi1010g00008 145 SUPERFAMILY NAC domain 2 110 IPR036093 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1010g00008 1 109 NAC Transcription Factor Family AT2G27300 31.858 1.76e-15 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi1010g00008 NAM 3.4e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1010g00008 - - vvo:131638861 283.878