Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1006g00003 ATGTCTGAGTTTGACACAAACATCCCAACAACTTTTGATCCCTTTGCTGAGGCAAATGCTGAGGACTCTGGTGCCGGTGCCGGGACAAAAGAATATGTTCATGTCCGTGTACAACAGCGTAACGGAAGGAAAAGCTTAACAACTGTTCAAGGGTTAAAGAAAGAGTACAGCTATAGCAAGATACTGAAGGACCTGAAGAAAGAATTCTGCTGTAATGGTACTGTTGTCGAGGACCCTGAGTTGGGCCAGGTCATACAACTTCAGGGTGATCAAAGGAAGAATGTTTCTACATTCCTTGTGCAGGCTGGCATTGTAAAGAAGGAGAATATCAAGCTTCATGGTTTCTAA 348 0.4368 MSEFDTNIPTTFDPFAEANAEDSGAGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGTVVEDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKLHGF 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1006g00003 115 Gene3D - 2 115 - -
Vivi1006g00003 115 NCBIfam translation initiation factor SUI1 7 115 IPR005874 GO:0003743
Vivi1006g00003 115 SUPERFAMILY eIF1-like 7 115 IPR036877 GO:0003743|GO:0006413
Vivi1006g00003 115 CDD eIF1_SUI1 31 114 IPR005874 GO:0003743
Vivi1006g00003 115 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 8 115 - -
Vivi1006g00003 115 MobiDBLite consensus disorder prediction 1 25 - -
Vivi1006g00003 115 FunFam Eukaryotic translation initiation factor SUI1 2 115 - -
Vivi1006g00003 115 ProSiteProfiles Translation initiation factor SUI1 family profile. 33 103 IPR001950 GO:0003743|GO:0006413
Vivi1006g00003 115 Pfam Translation initiation factor SUI1 30 104 IPR001950 GO:0003743|GO:0006413
Vivi1006g00003 115 PIRSF Transl_init_SUI1_Euk 1 115 IPR005874 GO:0003743
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1006g00003 1 115 Eukaryotic Initiation Factors Gene Family AT4G27130 86.957 3.18e-73 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1006g00003 K03113 - gmx:100784390 219.55