Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
ViunNC531g00001 ATGGATCACTACAGGGTTCTCGGCTTGCACCGAACCGCGACCAAGGAGGAAATCAAAACCGCTTTCAAGAAATTAGCTTTTCAGTTTCACCCGGACAAGCATTCCCAATCACCGAGGGCCATTAGGGAAAATGCCACAATTCGATTTAAGCAGGTATCGGAGGCCTACGAGGTCCTTATGGATGACCGAAAGCGAGCCGACTACAATTTCCGGCGGAGCTCGGGCGACCCCGGCAGAAGCAACCACTATTCTCAGTACAGCTACGGATACAGTAGGAGCGGGAGCAGGTACGAGTACAAACCTGGGTCTGGTGGTGGTGGTGGCTTAGCTTCCAATTTTGAAATGGCTCTTCGAATTTTGACGGGGCGGTCTTCAATTCTCTATCTCGGCTTCGCAGCGGCTATATTATGCGGGATAGTTGTCATTGATTCAAGCCGAGAATCCTTATGGAGAATGCAGAATTCTGGGAAATCTTTTGAAGAAGCCATGAAGTCCATTGAGAAAGCCAAAGCTTATAGAGAAGATAACATGAAGGAACGTCCTTGA 546 0.4872 MDHYRVLGLHRTATKEEIKTAFKKLAFQFHPDKHSQSPRAIRENATIRFKQVSEAYEVLMDDRKRADYNFRRSSGDPGRSNHYSQYSYGYSRSGSRYEYKPGSGGGGGLASNFEMALRILTGRSSILYLGFAAAILCGIVVIDSSRESLWRMQNSGKSFEEAMKSIEKAKAYREDNMKERP 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
ViunNC531g00001 181 CDD DnaJ 2 61 IPR001623 -
ViunNC531g00001 181 SUPERFAMILY Chaperone J-domain 1 96 IPR036869 -
ViunNC531g00001 181 ProSiteProfiles dnaJ domain profile. 2 72 IPR001623 -
ViunNC531g00001 181 FunFam DnaJ domain protein 1 90 - -
ViunNC531g00001 181 Gene3D DnaJ domain 1 118 IPR036869 -
ViunNC531g00001 181 SMART dnaj_3 1 64 IPR001623 -
ViunNC531g00001 181 Pfam DnaJ domain 2 69 IPR001623 -
ViunNC531g00001 181 ProSitePatterns Nt-dnaJ domain signature. 49 68 IPR018253 -
ViunNC531g00001 181 PANTHER CO-CHAPERONE PROTEIN DJLA 4 97 - -
ViunNC531g00001 181 PRINTS DnaJ domain signature 4 22 IPR001623 -
ViunNC531g00001 181 PRINTS DnaJ domain signature 22 37 IPR001623 -
ViunNC531g00001 181 PRINTS DnaJ domain signature 44 64 IPR001623 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
ViunNC531g00001 3 73 C2H2 Transcription Factor Family AT1G74250 39.437 2.17e-11 59.7