Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
ViunNC399g00011 ATGAGGATTGTAGGAATGGGTTTTCGCCCCACAGATGAAGAACTCGTCGACTTCTACCTCAAACACAGATTGCTCGGTGATGATCCCCGTGTTCGCGTCATGACTGACATAGATCTTTGCGATGTTGAACCTTGGGAAGTACCAGTGATGTTAGCAAAATCAGTAATACCATTCAAAGACCGAGAATGGTGTTTCTTCAGTCCTGTTAAATTGATGTCCTCAAATAGTAAAAGGTTTAACAGGAGAACCAAGTCTGGGTTCTGGAAACCCACTGGAAAAGACCGTGATGTTAGAAGCAGGGACACCAACACTGTCATTGGGACTAAGAAGACTCTTGTTTTCCAATGTGGTCGTGCTTCCAAAGGTGTCAATTCCAACTGGGTTATTCACGAATATCATGCTCTTAACTTTCTTGAAAGCCAGAATGCTTTTGTGTTATGCCGCTTGATAAAGAAACCTGAGAAAAAAACTGAAGGAGGAACTGCTGCACTGATATGTGATGAAGGGGAATCCAGTAGAAGCGTGGTTTCTGACTATGAAAATCAGGCGATAGCAGAAGGAGTTCCATCCGTAAGCTGA 579 0.4335 MRIVGMGFRPTDEELVDFYLKHRLLGDDPRVRVMTDIDLCDVEPWEVPVMLAKSVIPFKDREWCFFSPVKLMSSNSKRFNRRTKSGFWKPTGKDRDVRSRDTNTVIGTKKTLVFQCGRASKGVNSNWVIHEYHALNFLESQNAFVLCRLIKKPEKKTEGGTAALICDEGESSRSVVSDYENQAIAEGVPSVS 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
ViunNC399g00011 192 ProSiteProfiles NAC domain profile. 2 152 IPR003441 GO:0003677|GO:0006355
ViunNC399g00011 192 Pfam No apical meristem (NAM) protein 4 133 IPR003441 GO:0003677|GO:0006355
ViunNC399g00011 192 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 158 - -
ViunNC399g00011 192 Gene3D NAC domain 11 157 IPR036093 GO:0003677|GO:0006355
ViunNC399g00011 192 SUPERFAMILY NAC domain 4 152 IPR036093 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
ViunNC399g00011 4 154 NAC Transcription Factor Family AT3G49530 46.795 6.14e-43 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC ViunNC399g00011 NAM 1.1e-26 No_clan