Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
ViunNC399g00009 ATGGATGATGTTGTAGGATTCGGTTTCCGTCCCACAGAAGAAGAACTTGTGGACTATTACCTCAGACATAGGTTGCTCGGTGATGATCCACAAGTCCACGTCATCCCCGACATTGACCTTTGTCAAGGGGAACCTTGGGACGTGCCAATGTTATTCGGGGAATCAAATGTACAATTTGATTTCCCAGAATGGTTTTTCTTTAGTCCCGTTGATTTCAAGTATTCAAATAGTAAAAGGATTAACCGGACAACCAAGTGTGGCTTCTGGAAACCCACCGGAAAAGATCGTGAGATTAGAAGCTCCGACTCCAACACTCTCATTGCCACAAAGAAGACTCTTGTTTACTACAAAGGTCGCGTTTCACGTGGTCAGAAATCCAACTGGGTTATTCACGAATACCATGCTGTCACCTTTCACCAAAGCCAGAGGACTTTTGTTTTGTGTCGTCTGATGAAGAAACCTGGGGGAACAACTGAAGGTGGGGGTGATGAAGGGGAGAGCAGTAGAATCATGGTTTCTGGCTATCACAATCACTCAATAGGAACCACCTTTCAGCAAGACCAAACGTCTTTTCCAAACCCCTCATTTTACGATGCCCATTTTAGAAATGAATCTAACATTAAGCACAATTCATATGACGATACCCAGGAAGAGGAATTCGTGAATTCTTTTTTTGTTCAGGACAATTATGTTAACAATGAACAAGGTACAAATACCTACTTCAATACTTTCACCCAATCGGAGTCATTGAGAAAGGTATACGATACAGATGCTGAGGCCGTCTCTGAACAGGGTGATAATATTATGGATATTCCAACAGTGTTACTAGATATCTTAACTTAG 843 0.4211 MDDVVGFGFRPTEEELVDYYLRHRLLGDDPQVHVIPDIDLCQGEPWDVPMLFGESNVQFDFPEWFFFSPVDFKYSNSKRINRTTKCGFWKPTGKDREIRSSDSNTLIATKKTLVYYKGRVSRGQKSNWVIHEYHAVTFHQSQRTFVLCRLMKKPGGTTEGGGDEGESSRIMVSGYHNHSIGTTFQQDQTSFPNPSFYDAHFRNESNIKHNSYDDTQEEEFVNSFFVQDNYVNNEQGTNTYFNTFTQSESLRKVYDTDAEAVSEQGDNIMDIPTVLLDILT 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
ViunNC399g00009 280 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 204 - -
ViunNC399g00009 280 SUPERFAMILY NAC domain 5 153 IPR036093 GO:0003677|GO:0006355
ViunNC399g00009 280 ProSiteProfiles NAC domain profile. 3 153 IPR003441 GO:0003677|GO:0006355
ViunNC399g00009 280 Pfam No apical meristem (NAM) protein 5 134 IPR003441 GO:0003677|GO:0006355
ViunNC399g00009 280 Gene3D NAC domain 12 156 IPR036093 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
ViunNC399g00009 5 154 NAC Transcription Factor Family AT4G35580 51.613 7.31e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC ViunNC399g00009 NAM 1.5e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
ViunNC399g00009 - - vun:114166939 504.982