Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
ViunNC399g00002 ATGGGTAAAATTGTTGGTGTCGGTTTCCGTCCTATAGAACAAGAACTCGTCGATTTCTACCTCAAACACAAGTTGCTGGGTGATGATTCCCGTGTCGACGTTATCCCTGTCATTAACCTCTGCCATGTGGAACCTTCGGATGTACCAGGGATACTTGCAAAATCACGGATTCGATTGGTGACCCAGACTGGTTTTTCTTCAGTCCGGTTGATTTCAAGTATTCAAACAGAGCTGGAACACCAACACTCTCATTGCCACAAAGAAGAATCTTGTTTACTACAAGGAAGTGTTTCCTGTGGTGTCAAGTCCGACTGGGTTATTCACGAATATCACGCTGTTACCTTTCATGAAAGCGAGAATGCTTTTGTGTTATGCCGCTTGATAAAGAAACCTGAGAAAAAAACTGAAGGAGGAACTGCTGCACTGATATGTGATGAAGGGGAATCCAGTAGAAGCGTGGTTTCTGACTATGAAAATCAGGCGATAGCAGAAGGAGTTCCATCCGGAGGTACTCTAACCGGAATGGAAACAATCTGTCACGTAACATATCAGGCAGAAAAATGCATCTCCCCTACAGAACCGTCACTAATTGAAATTGAGCAGGATGACGATGCCTATTTTAGAAATGAAAACAACAATGGGCGGAGTCCTTCTGAAATTATGCAGATTCCTTACGAAACTATGCACACTCCTTGTGAAACTATGCACACTCCTTATGAAATTATGCAGATTCTTGTGAAACTATGCAGACTCTTTATGAAACTTTGCAGATTCCTTGTGAAACTATGCAAAGTTCTTGTGAAAGTATGCAGACTCCTTGTGAAACTATGCAGACTTCTTTTGAAAGTATGCAGACTCCTTGTGAAACTATGCAGACTTCTTTTGAAAGTATGCAGACTCCTTGTGAAACTATGCAGACTTCTTTTGAAAGTATGCAGACTCCTTGTGAAACTATGCAGACTCCTTTTGAAAGTCTGCAGACTCCTTGTGAACCTGTACAGACTCTTTGTGAAAGTATGCAGATTTCTTGTGAAAGTATGCAGAATCCTTGTGAACCTATGCAGATTTCTTGTGAAACTATGCAGATTTCTCATGAAACCAACCAAATTCCTTTTGAAATTTTGCAGTTTCTTTTGA 1137 0.409 MGKIVGVGFRPIEQELVDFYLKHKLLGDDSRVDVIPVINLCHVEPSDVPGILAKSRIRLVTQTGFSSVRLISSIQTELEHQHSHCHKEESCLLQGSVSCGVKSDWVIHEYHAVTFHESENAFVLCRLIKKPEKKTEGGTAALICDEGESSRSVVSDYENQAIAEGVPSGGTLTGMETICHVTYQAEKCISPTEPSLIEIEQDDDAYFRNENNNGRSPSEIMQIPYETMHTPCETMHTPYEIMQILVKLCRLFMKLCRFLVKLCKVLVKVCRLLVKLCRLLLKVCRLLVKLCRLLLKVCRLLVKLCRLLLKVCRLLVKLCRLLLKVCRLLVNLYRLFVKVCRFLVKVCRILVNLCRFLVKLCRFLMKPTKFLLKFCSFF 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
ViunNC399g00002 378 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 148 - -
ViunNC399g00002 378 SUPERFAMILY NAC domain 4 130 IPR036093 GO:0003677|GO:0006355
ViunNC399g00002 378 ProSiteProfiles NAC domain profile. 3 130 IPR003441 GO:0003677|GO:0006355
ViunNC399g00002 378 Pfam No apical meristem (NAM) protein 5 50 IPR003441 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
ViunNC399g00002 5 131 NAC Transcription Factor Family AT1G33060 28.205 5.94e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC ViunNC399g00002 NAM 1.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
ViunNC399g00002 - - vun:114172041 519.235