LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	ViunNC212g00010	ATGATTTTAGCCCTTATAAAAGTTCTAAAAAAACGGATTCCTCCTTTCACGCTCATGTCACGGCGAGGTACTGCAGAAGAAAAAACCGCAAAATCCGATCCAATTTATCGTAATCGATTAGTTAACATGTTGGTTAACCGTATTCTGAAACACGGAAAAAAATCATTGGCTTATCAAATTCTCTATCGAGCTATGAAAAAGATTCAACAAAAGACAGAAACAAATCCACTATCTGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAAGCAAGACGCGTAGGCGGATCAACTCATCAAGTTCCCGTTGAAATAGGATCCGCACAAGGAAAAGCACTTGCCATTCGTTGGTTATTGGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGTAGTGGCGATGCCATACGCAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA	522	0.408	MILALIKVLKKRIPPFTLMSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQILYRAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPVEIGSAQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR	173

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	ViunNC212g00010	173	CDD	uS7_Chloroplast	28	172	-	-
	ViunNC212g00010	173	Hamap	30S ribosomal protein S7 [rpsG].	19	173	IPR005717	GO:0003735\|GO:0006412\|GO:0015935
	ViunNC212g00010	173	SUPERFAMILY	Ribosomal protein S7	20	167	IPR036823	-
	ViunNC212g00010	173	Pfam	Ribosomal protein S7p/S5e	19	167	IPR023798	-
	ViunNC212g00010	173	Gene3D	Ribosomal protein S7 domain	19	173	IPR036823	-
	ViunNC212g00010	173	FunFam	30S ribosomal protein S7	19	173	-	-
	ViunNC212g00010	173	PANTHER	RIBOSOMAL PROTEIN S7	20	167	IPR000235	GO:0006412
	ViunNC212g00010	173	ProSitePatterns	Ribosomal protein S7 signature.	38	64	IPR020606	GO:0003723\|GO:0003735\|GO:0006412
	ViunNC212g00010	173	NCBIfam	30S ribosomal protein S7	21	173	IPR005717	GO:0003735\|GO:0006412\|GO:0015935
	ViunNC212g00010	173	PIRSF	RPS7p_RPS7a_RPS5e_RPS7o	5	173	IPR000235	GO:0006412

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	ViunNC212g00010	39	167	Cytoplasmic Ribosomal Protein Gene Family	AT2G37270	36.029	4.00e-11	57.4

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	ViunNC212g00010	K02992		-	vvi:132254818	311.997

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