Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03988 ATGGTGAATGGCGAACACAACCTGTCAATGCAACTGCCAGATCCAACCATGAAGCAACCCAACGTTAACGTTTCCGATCAGAGCATGTCGAAGAACCACATCTCACCCACCCGTCGCAGGTTTCGGTCCAGAAGGAGGAAAACCACCTCTGCTTGCCCCCTCACATCGCTCAGCTTCCGCGCATACAGCATCGACGGCACCAACAGTCCCTACTACAAGGGTCTCACCGACCAGTCTCTTGCCATTGTGGACACCATACCCTCCTGCACTCAACCTCATCCTCATCCTCACACCCCTTCCTCCGACCTTCTTTCAAGTCCTTATTACAAAGGCCTTACGGACTATTCCCTTGCTATTGGTCCTTGGACCCCTCACAACCATCCTCTTCCTTTTCCCCACAACTCCCTCTCCTACACCCCTAGTCCTTACTATGCAGGCCTTCTCACTCACTACACCTTTCTCTTCCATGCACCCTCGCTTCAACCTCCTTTCACTACAAACCCTAAACTCTCCCTTCCAATCATCAAGACAGACCCTACTTTGAAGGACTTGATGGTCGATGCTCCTCACGTTGACTTTGTTACTCAAGGAACTGATGAAGTTGGCAATCATGCATTGGAAGAACTTGGCGAGAAAACTTGTGTTGTGGTTGATAAAGAGAAGGCATTGAGAGAGAATGATGTTGAGATGGTGACTGAAGTGTCAGAAGAAACAATGTTGGATAGAAAGTTGATGAGTGATGTTACTGAAGAGAAGCCATTGGGGGAGAAAGCATCGGAAACAAGCGAGATGGATGTGTGGAAGGAAGAGGAAGTGAAAGAAGTTGTTTCATCATCAGAAGCAGTTGTTGCTTCGTCTGAATCTGAATGGAAAGAAGGAGATGGGTACGATTATACATGGGCAGCCAAATACCAACCCATGGCCTTGGAAGACTTCATCTGCAACAAAGATATAGCAAGTCAACTCAAGACAATGGTAGAAGGTGGTTGTGGGTGCAGCCACTTTATATTTGAAGGACCACCAAGCGTGGGGAAGAGATCCATGATAAGGGCTATGCTGGGAGAGGTATTCGGCTCCGAAAGGGTCCAGGTCGTAGAAGAATATAAAAACTTCATTTTGAAGGGAGAAATGGTTGATAGTGTGCAAGTGCGCGTGAAGAAATCACTCCATCATGTGGAGGTGAATCTGTCAGAGACAAATGGATACGAAAAACATGTAATTGTTGATTTATTCAAGGAAACATATGGGCAGGTGATAGATAACTCTCAACCTTGTTGCCCAGAAAACTGCAAAGCAATCGTTTTGTACGAGGCGGAAAAGCTGTCGATAGAATCGTTGTTGTACATTAAGTGGCTGCTAGAGAAGTACGACGGGTGTAATAAGGTTTTCTTCTGTTGCTCCGATGAATCTAAGCTCCAACCTGTGAAGCCACTTTGCATCACTCTGCGCCTTTCATCGCCGTCAACCCAAGAGCTAGCTAAGATTTTGGAAAACATTGCAATAGAAGAAGGGATACAGTTATCACGCCACTTAATCGATACCATAATTTTGAGATCCAACAACAACCTACGCCAAGCCATTCGCTCGTTAGAGGCCACTTGCCGAAACAGGAATGCTATCAAAGACGACGACGTGATTCTAACGGGTTGGGAACAAGATATTTTGGATATTGCCAAGAAAATAATCCAAGAGCAAAGTCCACGACAGTTGTACGCCATTCGTAGAAAGCTACGAAGTCTTATGAGCCATGATGTTCCTCCAGATTTTATTTACAAGTCTTTGGTACCAGAATTAACCACTCTTGTTCATCACTCGCTACGCCCAGGGGTTGCCAAACTCGACAGGGACTTCATGAGAGCCAGTGAAATGAAATTTGAAACTATGAAGCAGCACTTCTATCATGCTCAAAAACAGTCGGAATCTGATGACAAGAACAATGATTCAACAAAAAAGAATGCCTTAACTTACTTAAAAGTGGAAGAGTTTATAGCGAAAGTGATGAGCTGGTACAAGAATTGGTCTGAAAAAGACAATAAGCAGTAG 2043 0.4503 MVNGEHNLSMQLPDPTMKQPNVNVSDQSMSKNHISPTRRRFRSRRRKTTSACPLTSLSFRAYSIDGTNSPYYKGLTDQSLAIVDTIPSCTQPHPHPHTPSSDLLSSPYYKGLTDYSLAIGPWTPHNHPLPFPHNSLSYTPSPYYAGLLTHYTFLFHAPSLQPPFTTNPKLSLPIIKTDPTLKDLMVDAPHVDFVTQGTDEVGNHALEELGEKTCVVVDKEKALRENDVEMVTEVSEETMLDRKLMSDVTEEKPLGEKASETSEMDVWKEEEVKEVVSSSEAVVASSESEWKEGDGYDYTWAAKYQPMALEDFICNKDIASQLKTMVEGGCGCSHFIFEGPPSVGKRSMIRAMLGEVFGSERVQVVEEYKNFILKGEMVDSVQVRVKKSLHHVEVNLSETNGYEKHVIVDLFKETYGQVIDNSQPCCPENCKAIVLYEAEKLSIESLLYIKWLLEKYDGCNKVFFCCSDESKLQPVKPLCITLRLSSPSTQELAKILENIAIEEGIQLSRHLIDTIILRSNNNLRQAIRSLEATCRNRNAIKDDDVILTGWEQDILDIAKKIIQEQSPRQLYAIRRKLRSLMSHDVPPDFIYKSLVPELTTLVHHSLRPGVAKLDRDFMRASEMKFETMKQHFYHAQKQSESDDKNNDSTKKNALTYLKVEEFIAKVMSWYKNWSEKDNKQ 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03988 680 SUPERFAMILY post-AAA+ oligomerization domain-like 549 607 IPR008921 GO:0003677|GO:0006260
Viun9g03988 680 MobiDBLite consensus disorder prediction 1 47 - -
Viun9g03988 680 Gene3D - 298 487 IPR027417 -
Viun9g03988 680 MobiDBLite consensus disorder prediction 1 34 - -
Viun9g03988 680 Gene3D - 549 670 - -
Viun9g03988 680 FunFam Replication factor C subunit 3 298 487 - -
Viun9g03988 680 Gene3D - 488 548 - -
Viun9g03988 680 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 299 619 - -
Viun9g03988 680 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 296 545 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03988 Viun-Chr9 43708742 43712898 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03988 300 673 Core DNA Replication Machinery Family AT5G27740 29.815 8.17e-47 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03988 K10756 - gmx:102664389 804.283