Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03928 ATGAGTGGTGCCATAGCAACCGACAGAGGGAATTGCTCATCTTACAGCGGTTCTCAGATGCCACATTCGTGCAGGAACGATCCCATCATAGTTGATCTCTCTCCGGAGGTCTCAGAAAACAGGTCAGAGCATTGTTGCCGTGGTGGCCTCCTCTCTGCCTGGTCTATTGATCCTTTCGGTGCATTCTCTTCATTTGAACTTGAAGTGCGCAACGTGGGAGATAACCCACTTGGACAACCACCTAACAATCTTACATTGATGGCCCCAGGTCCTGGTTACACTTGTAGCCCCCTTCTTGACACTCATCCCTCGGTCTCCTCAGATTTTGGGGGACTAAGACAAGTTCCTGTTCTCAGAACTTGGAAATCAACATGTGCGTATTCAAGTTTCTTAGCAAACACATTACCGGTATGCTGTGTTTCCCTCTCATCATTTTACAACCCCGTCGTCACATCTTGCCGAAATTGCAGTTGCGGATGCAGAGAAGCATATAAAAGTACAGCTTCTTGCATAAGGCCTGGTTCCTTGTCACGGTCCAATGAGGACAACACGATTGAAACCGTTGAATGCACCGACCACATGTGCCCCGTTCGAGTCCACTGGCATTTCAAGAACAACTATATGAACCAGTGGAGAGTGAAGCTTACCATTTCTAACTACAATTACAACAAAAACTACTCCAACTGGAACTTGCTGGTCCAACATCCTGGTTTCACTCAAAAAACATCAACCTACAGTTTCAACAGCACTAAACTTCCCACCCTCGGAATCCAAGATGGAGTTTCGCTGTTTTGGGGAATAGATTTTTACAACAATGAGCTATTGCATTCTGAAAAGGCCAAAGTGGGTGTTGTGACAACAGAAATACTGTTGGATAAAGATCCAAATTCTTTCACAGTAAGTAATGGATGGGCATTTCCCAGAAGAATATATTTCAACGGTGACAACTGCGAAATGCCTTTACCTGACACGTTTCCTATGCTGCCAAATCGTAGCTCTACTCTAGCACCTCCTTATTATGGTTTTACTCTCTTATTCATCCTTTTGTTTCTTCCCCTGTTAGTCTCTTGGGTTTGA 1077 0.4475 MSGAIATDRGNCSSYSGSQMPHSCRNDPIIVDLSPEVSENRSEHCCRGGLLSAWSIDPFGAFSSFELEVRNVGDNPLGQPPNNLTLMAPGPGYTCSPLLDTHPSVSSDFGGLRQVPVLRTWKSTCAYSSFLANTLPVCCVSLSSFYNPVVTSCRNCSCGCREAYKSTASCIRPGSLSRSNEDNTIETVECTDHMCPVRVHWHFKNNYMNQWRVKLTISNYNYNKNYSNWNLLVQHPGFTQKTSTYSFNSTKLPTLGIQDGVSLFWGIDFYNNELLHSEKAKVGVVTTEILLDKDPNSFTVSNGWAFPRRIYFNGDNCEMPLPDTFPMLPNRSSTLAPPYYGFTLLFILLFLPLLVSWV 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03928 358 PIRSF COBRA 1 358 IPR006918 GO:0010215|GO:0016020
Viun9g03928 358 MobiDBLite consensus disorder prediction 1 21 - -
Viun9g03928 358 PANTHER PROTEIN COBRA 1 334 IPR006918 GO:0010215|GO:0016020
Viun9g03928 358 Pfam COBRA-like protein 1 128 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03928 Viun-Chr9 43383323 43385376 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03928 1 355 COBRA Gene Family AT3G29810 46.814 3.69e-108 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03928 - - vra:106760500 681.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03928 9 43383323 43385376 Viun9g03928 9 43383323 43385376 ECH