Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03913 ATGGCCGCGTCTAATCTCTCCACCCTCTGCTCCTCTTCACACTCCAAACCCTCTTTCCCTTTCTTCAACACACAAAGCTTCAGCGTCAACACTAACACTCTTTTTCTCAACACCACCACCAACTCCTTTCAAACCCTTCTCTCTCATTCCACCCGCTACACTCTGCCTCTCCCATGCACCAAAACCACAAACACTTTCGCCTCCTTCAATGATGACGAAAAGCCTCGCGAAGAGTGCGGCGTTGTGGGCATCTACGGCGACCCAGAAGCCTCCCGTCTCTGCTCCCTCGCCCTCCACGCCCTCCAGCACCGCGGCCAGGAAGGCGCCGGCATCGTCGCCGTCGACAACAACGTCCTCCACACAGTCAACGGCGTTGGCCTCGTTTCTGACGTCTTCGACGAGACTAAGCTCTCTCAGCTACCCGGCTCCTGCGCCATTGGCCACGTCCGCTACTCCACCGCGGGACACTCCAGGCTCTGCAACGTCCAACCCTTCGTCGCCGGCTACCGCTTCGGCTCCGTCGCCGTCGCGCACAATGGAAACTTCGTGAACTACCGGTCCCTGCGCGCCAAACTGGAAGACAACGGGTCCATCTTCAACACGACCTCCGACACCGAGGTGGTGCTCCACCTGATCGCCACCTCCAAGCACAGACCTTTCCTACTGAGAATCGTGGATGCCTGCGAGAATCTGAAGGGCGCGTACTCCCTGGTGTTCCTCACGGAGGACAAGCTGGTGGCCGTGAGGGACCCCTTCGGGTTCCGACCGTTGGTGATGGGAAGGAGAAGCAACGGCGCTGTGGTTTTCGCCTCGGAGACATGCGCGCTGGATTTGATCGAAGCGACGTACGAGCGAGAGGTGAACCCGGGTGAGGTTGTGGTGGTGGACCACACCGGAATCCAATCCCTCTGCCTCGTGACTCATCCGGAGCCAAAGCAATGCATCTTCGAGCACATATACTTCGCGCTTCCCAACTCTGTTGTCTTCGGGAGGTCCGTGTACGAGTCCAGGAGAAAATTCGGGGAAATACTGGCCACCGAGAGCCCCGTCGAGTGCGACGTAGTGATCGCGGTTCCTGATTCCGGGGTGGTGGCTGCGCTTGGCTACGCTGCAAAAGCTGGGGTTCCCTTTCAGCAGGGGTTGATAAGGTCGCACTATGTGGGGAGGACCTTCATCGAGCCCTCGCAGAAAATAAGAGATTTTGGGGTGAAGCTGAAGCTGTCTCCGGTGCGTGGCGTGCTCGAAGGGAAGAGGGTTGTGGTGGTGGATGACTCCATTGTGAGGGGCACCACATCGTCCAAGATTGTGAGGCTGATAAAGGAAGCGGGTGCCAAAGAGGTCCACATGAGGATTGCGTGTCCACCCATTGTTGGGTCCTGTTACTACGGCGTCGACACCCCCAGTAAGGAGGAGTTGATTTCCAACAGGATGAGTGTGGAGGAGATAAGAGAGTTTATTGGGTCTGATTCCCTCGCTTTTCTTCCCTTGGACACGTTGAAGAGGTTGTTGGAGGATGATGCTCCTAACTACTGCTATGCTTGCTTCTCCGGAAAATACCCTGTTCAGCCGGAGGAACTTAAAACCAGCAACCTCAATGAGTTTGATTGGGACGATGCTTTGAATGGGAGTTTGAAATCTATTGAGAACGAGGGTTGGGTTAGAAACCAGGAGGGAGTGTCTGAGAATAAGATTGTTAGTGTCTGA 1704 0.5593 MAASNLSTLCSSSHSKPSFPFFNTQSFSVNTNTLFLNTTTNSFQTLLSHSTRYTLPLPCTKTTNTFASFNDDEKPREECGVVGIYGDPEASRLCSLALHALQHRGQEGAGIVAVDNNVLHTVNGVGLVSDVFDETKLSQLPGSCAIGHVRYSTAGHSRLCNVQPFVAGYRFGSVAVAHNGNFVNYRSLRAKLEDNGSIFNTTSDTEVVLHLIATSKHRPFLLRIVDACENLKGAYSLVFLTEDKLVAVRDPFGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVNPGEVVVVDHTGIQSLCLVTHPEPKQCIFEHIYFALPNSVVFGRSVYESRRKFGEILATESPVECDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRGVLEGKRVVVVDDSIVRGTTSSKIVRLIKEAGAKEVHMRIACPPIVGSCYYGVDTPSKEELISNRMSVEEIREFIGSDSLAFLPLDTLKRLLEDDAPNYCYACFSGKYPVQPEELKTSNLNEFDWDDALNGSLKSIENEGWVRNQEGVSENKIVSV 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03913 567 Gene3D - 338 502 IPR029057 -
Viun9g03913 567 NCBIfam amidophosphoribosyltransferase 79 520 IPR005854 GO:0004044|GO:0009113
Viun9g03913 567 CDD PRTases_typeI 341 474 IPR000836 -
Viun9g03913 567 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 79 298 IPR017932 -
Viun9g03913 567 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 79 520 IPR029055 -
Viun9g03913 567 Hamap Amidophosphoribosyltransferase [purF]. 78 519 IPR005854 GO:0004044|GO:0009113
Viun9g03913 567 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 77 527 - -
Viun9g03913 567 Pfam Phosphoribosyl transferase domain 337 450 IPR000836 -
Viun9g03913 567 CDD GPATase_N 79 329 IPR035584 -
Viun9g03913 567 SUPERFAMILY PRTase-like 314 526 IPR029057 -
Viun9g03913 567 Pfam Glutamine amidotransferase domain 161 276 IPR017932 -
Viun9g03913 567 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 79 302 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03913 Viun-Chr9 43313508 43315633 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03913 71 554 PRT Gene Family AT2G16570 81.443 0.0 804
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03913 K00764 - gmx:548065 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03913 9 43313508 43315633 Viun9g03913 9 43313508 43315633 ECH