Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun9g03895 | ATGGAGGTAGCTGTGGCCAAAGCGTTGAAACCGAGTTTAAGGAGGGAGTTCATCGTTCAGCAAACGCACTGCGAGGATTTTTTTTGCCTCAACGCCAACAACGTTGCCGGCGGCGACGATTTCTTCGTCGACGACCTATTTGACTTTTCAGACGGCTCTCTTCACCACGAACCACAAGAATACGTGGAAGAAAAAAAGAGTTTATCGGCCTCGTCGCAGTCAAAGGACCGTGGAGAAGACGATAGCAACTCTAATTCCACCGGAGTTTCTTATGACTCACTTTTCTCCGCCGAACTCGCCGTTCCGGCCGGTGATTTGGAGGACCTAGAGTGGGTTTCACACTTTGTTGACGATTCTCTCCCGGAGCTGTCTCTTTTATACCCGGTTCGTCCGGAGGAGGTGAACCGGCGAGTCGAACCGGAACCCTCAGCGAAGAAAACGCCTCGTTTTCCGTGTGAAATGAAGATAGCGACCAAGACGAGAACGGTAAGGAATAGAAAACCCAACGCTCGCGTGTGGTCGTTGGGCCCGTTGCTCTCCCTCCCGTCCTCGCCGTCTTCGTGCTCTTCTTCCGCGACGGAGCCGCCCGCGAAGAAGCAGAAGAAGCGGGCCGAGGCCCAGCCCGTTGGGGCCCAGGTTCAGCGGCGGTGCAGTCACTGTCAGGTGCAGAAGACGCCGCAGTGGAGGACGGGCCCACTGGGCGCAAAAACCCTCTGCAACGCGTGCGGGGTCCGCTACAAATCGGGTCGGCTTTTTTCGGAGTACAGACCGGCCTGTAGCCCAACCTTCTGCAGCGATATTCACTCCAATAGCCACCGGAAAGTGTTGGAGATTCGCAAGAAGAAAGGGGTGTCTGGGCCGGACACCGGTCCGGCCCATCCCCAGGCCCAAATGGTTCCCACCTGCTGA | 909 | 0.5666 | MEVAVAKALKPSLRREFIVQQTHCEDFFCLNANNVAGGDDFFVDDLFDFSDGSLHHEPQEYVEEKKSLSASSQSKDRGEDDSNSNSTGVSYDSLFSAELAVPAGDLEDLEWVSHFVDDSLPELSLLYPVRPEEVNRRVEPEPSAKKTPRFPCEMKIATKTRTVRNRKPNARVWSLGPLLSLPSSPSSCSSSATEPPAKKQKKRAEAQPVGAQVQRRCSHCQVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFSEYRPACSPTFCSDIHSNSHRKVLEIRKKKGVSGPDTGPAHPQAQMVPTC | 302 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun9g03895 | 302 | ProSiteProfiles | GATA-type zinc finger domain profile. | 211 | 247 | IPR000679 | GO:0006355|GO:0043565 | |
Viun9g03895 | 302 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 211 | 272 | - | - | |
Viun9g03895 | 302 | Gene3D | - | 210 | 261 | IPR013088 | GO:0006355|GO:0008270 | |
Viun9g03895 | 302 | PANTHER | GATA TRANSCRIPTION FACTOR | 28 | 295 | - | - | |
Viun9g03895 | 302 | PIRSF | Txn_fac_GATA_plant | 12 | 300 | IPR016679 | GO:0003677|GO:0005634|GO:0045893 | |
Viun9g03895 | 302 | ProSitePatterns | GATA-type zinc finger domain. | 217 | 242 | IPR000679 | GO:0006355|GO:0043565 | |
Viun9g03895 | 302 | MobiDBLite | consensus disorder prediction | 281 | 302 | - | - | |
Viun9g03895 | 302 | MobiDBLite | consensus disorder prediction | 175 | 210 | - | - | |
Viun9g03895 | 302 | FunFam | GATA transcription factor | 208 | 290 | - | - | |
Viun9g03895 | 302 | MobiDBLite | consensus disorder prediction | 60 | 89 | - | - | |
Viun9g03895 | 302 | Pfam | GATA zinc finger | 217 | 250 | IPR000679 | GO:0006355|GO:0043565 | |
Viun9g03895 | 302 | MobiDBLite | consensus disorder prediction | 60 | 82 | - | - | |
Viun9g03895 | 302 | CDD | ZnF_GATA | 216 | 273 | IPR000679 | GO:0006355|GO:0043565 | |
Viun9g03895 | 302 | SMART | GATA_3 | 211 | 265 | IPR000679 | GO:0006355|GO:0043565 | |
Viun9g03895 | 302 | MobiDBLite | consensus disorder prediction | 179 | 195 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun9g03895 | Viun-Chr9 | 43187864 | 43189452 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun9g03895 | 40 | 282 | C2C2-Gata Transcription Factor Family | AT4G36240 | 44.094 | 3.26e-54 | 175 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-GATA | Viun9g03895 | GATA | 9.5e-16 | CL0167 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun9g03895 | - | - | gmx:100808242 | 462.611 |