Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03885 ATGGCTAAGCCGAAGGCTCCAAGGCGAACCCTAGAGTCATACTCAGTCAAACACATAAGCAAAACTATCAGAGCTGGTGATTGCGTGCTCATGCGACCATCAGATCCGGCAAAACCCTCATATGTGGCCAGAATCGAGCGGATCGAGGCGGATGGTCGTGGCGCAAATGTGAAAATTCATGTCCGGTGGTACTATCGGCCGGAGGAGTCAATCGGTGGTCGCCGCCAGTTTCATGGCTCGAAGGAAGTTTTCCTCTCTGATCACTTTGATGTTCAGAGCACCGACACAATCGAAGGCAAGTGTACGGTCCACAGCTTCAAGAGCTACACAAAACTGGATGCTGTTGGGAACGACGATTTCTTCTGTCGGTTTGAGTACAATTCCTCCACCGGTGCCTTCAATCCGGATAGAGTTGCCGTGTATTGTAAATGTGAGATGCCTTACAATCCTGATGACCTAATGGTCCAATGTGAGGGCTGCAGTGACTGGATCGTACACTCAAGAGTTTGA 510 0.5 MAKPKAPRRTLESYSVKHISKTIRAGDCVLMRPSDPAKPSYVARIERIEADGRGANVKIHVRWYYRPEESIGGRRQFHGSKEVFLSDHFDVQSTDTIEGKCTVHSFKSYTKLDAVGNDDFFCRFEYNSSTGAFNPDRVAVYCKCEMPYNPDDLMVQCEGCSDWIVHSRV 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03885 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 136 168 IPR013083 -
Viun9g03885 169 ProSiteProfiles BAH domain profile. 21 137 IPR001025 GO:0003682
Viun9g03885 169 SUPERFAMILY FYVE/PHD zinc finger 130 163 IPR011011 -
Viun9g03885 169 Gene3D - 2 135 IPR043151 -
Viun9g03885 169 Pfam BAH domain 22 136 IPR001025 GO:0003682
Viun9g03885 169 SMART BAH_4 21 137 IPR001025 GO:0003682
Viun9g03885 169 PANTHER OS08G0421900 PROTEIN 5 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03885 Viun-Chr9 43127339 43130875 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03885 41 139 Core DNA Replication Machinery Family AT4G14700 31.313 9.47e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03885 K25868 - gmx:100787968 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03885 9 43127339 43130875 Viun9g03885 9 43127339 43130875 ECH