Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03883 ATGATCATTCCGGAGAAGAACCGTAAGGAGATCTGCAAATACCTCTTCCAAGAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGATTGATGTGCCTAATTTGCAGGTGATTAAGCTGATGCAAAGTTTCAAGTCCCGTGAGTACGTGAGAGAGACCTTTGCTTGGATGCATTATTACTGGTTCCTCACCAATGATGGCATCGAGTTTCTCAGAACCTACCTTAACCTTCCTTCCGAAATTGTTCCTGCCACTTTGAAGAAACAGGCCAAGCCACCTGGCAGACCCTTTGGTGGCCCCTCCGGTGATCGCCCTAGGGGTCCTCCTCGCTTTGAAGGCGAGCGGAGGTTTGGCGGCGATCGTGACGGATATCGCGGAGGTCCCCGAGGACCTGGTGGAGACTTTGGAGGAGACAAAGGAGGAGCTCCTGCTGACTACAGACCCTCTTTTGGGGGACCTGGAGGAAGGCCTGGCTTTGGTCGTGGATCTGGTGGTTTTGGGGCGCCAACCAGCTCAAATATTCCTTAA 543 0.523 MIIPEKNRKEICKYLFQEGVCFAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPPGRPFGGPSGDRPRGPPRFEGERRFGGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGSGGFGAPTSSNIP 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03883 180 Gene3D - 1 104 IPR036388 -
Viun9g03883 180 MobiDBLite consensus disorder prediction 112 128 - -
Viun9g03883 180 FunFam 40S ribosomal protein S10 1 104 - -
Viun9g03883 180 Pfam Plectin/S10 domain 3 94 IPR005326 -
Viun9g03883 180 PANTHER 40S RIBOSOMAL PROTEIN S10 1 174 IPR037447 -
Viun9g03883 180 MobiDBLite consensus disorder prediction 91 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03883 Viun-Chr9 43114921 43116758 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03883 1 180 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 75.556 3.69e-76 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03883 K02947 K09422 gmx:100500445 231.491