Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03870 ATGGCTTCGTCGAGTGGAACATCTTCAGGGTCGTCTCTGCTTCAGAATTCGGGTTCAGAGGAGGACCTGCAGGCGGTGATGGATGAGAGGAAGAGGAAGAGAATGATATCGAACCGCGAATCGGCGAGGCGATCCCGAATGAGGAAGCAGAAGCACTTGGATGATCTGGCATCACTGGTGACTCAGCTGAGGAGCGAGAATCACCAGATTCTGACATCGGTGAACCTCACCACCCAGAAGTACTTGGCGGTGGAGGCTGAGAACTCGGTGCTGAGAGCACAGGTGAGCGAGTTGAGCCACCGGTTAGAGTCTCTGAACGAGATCAACCACTTCTTGAACTCCACCAATGGTGTCTTTGGGCCTCCGGGCCCGTCACCAACCTCCTTCTTTGAGCCCGAGGGTAGCTCCACCTTCTTCAACAACAACCCTTTCAACATGGCATATCTCAGCCAACCGATCATGGCTTCTGCAGATATGTTGCAGTACTGA 489 0.5358 MASSSGTSSGSSLLQNSGSEEDLQAVMDERKRKRMISNRESARRSRMRKQKHLDDLASLVTQLRSENHQILTSVNLTTQKYLAVEAENSVLRAQVSELSHRLESLNEINHFLNSTNGVFGPPGPSPTSFFEPEGSSTFFNNNPFNMAYLSQPIMASADMLQY 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03870 162 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 160 - -
Viun9g03870 162 MobiDBLite consensus disorder prediction 1 22 - -
Viun9g03870 162 Gene3D - 28 82 - -
Viun9g03870 162 Coils Coil 88 108 - -
Viun9g03870 162 Pfam bZIP transcription factor 30 76 IPR004827 GO:0003700|GO:0006355
Viun9g03870 162 MobiDBLite consensus disorder prediction 23 50 - -
Viun9g03870 162 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Viun9g03870 162 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Viun9g03870 162 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Viun9g03870 162 MobiDBLite consensus disorder prediction 1 50 - -
Viun9g03870 162 FunFam BZIP transcription factor 28 79 - -
Viun9g03870 162 SUPERFAMILY Leucine zipper domain 30 81 IPR046347 GO:0003700|GO:0006355
Viun9g03870 162 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03870 Viun-Chr9 43059426 43060714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03870 24 162 bZIP Transcription Factor Family AT4G34590 53.020 5.39e-44 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun9g03870 bZIP_1 7.9e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03870 K25786 - gmx:778171 218.009